Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00935 ATGGCTGCTTCAACGATGGCTCTTTCCTCCCCGTCCTTCGCTGGAAAGGCAGTGAAGTTCTCTCCCTCTGCTCCCGAGATTGTTGGAAATGGCAGAGTCAGCATGAGGAAGACAGGCGGTAAACCTGCATCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGTCCATTCTCTGGGGAGGCTCCCTCCTACTTGACCGGAGAATTCCCCGGAGACTACGGCTGGGACACTGCTGGTCTCTCCGCTGACCCAGAGACCTTCGCCAAGAACCGAGAGCTCGAAGTCATACACAGTCGGTGGGCCATGCTCGGAGCTCTCGGCTGCGTTTTCCCGGAGCTTTTATCTCGGAACGGTGTCAAATTCGGAGAGGCCGTGTGGTTCAAAGCGGGATCACAGATCTTCAGCGAAGGAGGACTGGACTACCTGGGCAACCCGAGCTTGGTTCATGCTCAGAGCATCCTGGCAATCTGGGCTTCTCAAGTAATCTTGATGGGCGCCGTCGAAGCCTACCGTATCGCCGGCGGCCCACTCGGAGAAGTCACCGACCCAATCTACCCAGGCGGTTCGTTCGACCCATTGGGTCTAGCTGACGACCCGGAGGCATTCGCAGAGTTGAAAGTGAAAGAATTAAAGAACGGAAGACTAGCCATGTTCTCCATGTTCGGATTCTTCGTTCAGGCCATCGTCACCGGAAAAGGACCTCTTGAAAACCTTGCCGATCACCTTGCCGACCCTGTCAACAACAACGCCTGGGCTTACGCCACCAACTTCGTTCCCGGAAAGTGA 798 56.52 MAASTMALSSPSFAGKAVKFSPSAPEIVGNGRVSMRKTGGKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEAYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10678062 10678859 + Bma011426.1 Bma14g00935 94916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00935 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Bma14g00935 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 265 - -
Bma14g00935 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Bma14g00935 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Bma14g00935 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01496 Bma-Chr1:29519144 Bma14g00935 Bma-Chr14:10678062 7.77E-164 dispersed
Bma01g02471 Bma-Chr1:82382934 Bma14g00935 Bma-Chr14:10678062 5.31E-67 dispersed
Bma02g01306 Bma-Chr2:55191335 Bma14g00935 Bma-Chr14:10678062 9.67E-154 dispersed
Bma10g00936 Bma-Chr10:19395776 Bma14g00935 Bma-Chr14:10678062 2.35E-167 dispersed
Bma11g00950 Bma-Chr11:42441085 Bma14g00935 Bma-Chr14:10678062 0 dispersed
Bma12g00859 Bma-Chr12:39396188 Bma14g00935 Bma-Chr14:10678062 1.42E-153 dispersed
Bma14g00935 Bma-Chr14:10678062 Bma14g00970 Bma-Chr14:11191205 0 dispersed
Bma14g00934 Bma-Chr14:10659609 Bma14g00935 Bma-Chr14:10678062 1.91E-167 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00935 K08912 - rcu:8289767 519.235