Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00951 ATGCCGATCGCAAACGTGATACGAATAATGCGCAAAATCCTCCCTCCCCATGCAAAAATCTCCGACGACGCGAAAGAAACGATTCAAGAATGCGTCTCCGAGTACATCAGCTTCGTCACCGGCGAAGCCAACGAGCGCTGCCAGAGGGAGCAGCGGAAGACCATCACCGCCGAGGACGTGCTCTGGGCAATGAGCAAGCTGGGTTTCGACGATTACATCGAGCCTCTCACTCTCTACCTCCACCATTACCGAGAAATGGAGGGCGTCAAGAGAACGGCGGACTACGGCGGAGGAGGAGGATTAGGGCTTTCTACGGCGTTTCATTTGGGCCACAACCGCCATGGGTTTTTGGGCTACTTGAAGGATTCGCCTTCTTCTCAGTCAGCCATGCCAAAAGAAGAACACCATCTCCAGCCAGCCGGCTATAAGTAA 432 54.17 MPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHHYREMEGVKRTADYGGGGGLGLSTAFHLGHNRHGFLGYLKDSPSSQSAMPKEEHHLQPAGYK 143
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10825725 10826156 - Bma011443.1 Bma14g00951 94932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00951 143 Gene3D Histone, subunit A 1 99 IPR009072 GO:0046982
Bma14g00951 143 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 99 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bma14g00951 143 ProSitePatterns NF-YB/HAP3 subunit signature. 31 47 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bma14g00951 143 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 1 99 - -
Bma14g00951 143 SUPERFAMILY Histone-fold 1 94 IPR009072 GO:0046982
Bma14g00951 143 MobiDBLite consensus disorder prediction 122 143 - -
Bma14g00951 143 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 64 IPR003958 -
Bma14g00951 143 PRINTS CCAAT-binding transcription factor subunit A signature 28 46 - -
Bma14g00951 143 PRINTS CCAAT-binding transcription factor subunit A signature 47 65 - -
Bma14g00951 143 PRINTS CCAAT-binding transcription factor subunit A signature 66 84 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00661 Bma-Chr9:44215882 Bma14g00951 Bma-Chr14:10825725 1.31E-17 dispersed
Bma14g00951 Bma-Chr14:10825725 Bma12g00846 Bma-Chr12:39281855 1.58E-44 dispersed
Bma14g00951 Bma-Chr14:10825725 Bma10g00590 Bma-Chr10:7262662 4.71E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58351 PF00808 CBFD_NFYB_HMF 9.40E-26 CL0012 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00951 K08065 - zju:107407392 199.904