Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00953 ATGAGGCTTTCTTCAGCTGGTTTTAGTCCTCAATCCCATGAAGGAGAGAAGAAGGTCTTAAATTCTGAGCTATGGCATGCTTGTGCTGGTCCTCTGGTTTCTCTCCCTGCAACAGGAAATAGAGTTGTGTATTTTGCTCGAGGTCATAGTGAACAGGTTACTGCCTCAACGAACAAGGAAGTGGACACACATATCTCAAGCTATCCGAGCTTACCACCTCAACTTATTTGCCAACTTCACAATGTGACTATGCATGCAGATGTTGAGACAGATGAAGTGTATGCTCAAATGACATTGCAGCCGCTAAGTCAACAAGAGCAAAAGGAAACTTACCTTCCAGCTGAGTTGGGCGCTCCTAGTAAACAACCCACAAATTATTTTTGCAAAACCTTAACCGCGAGCGATACGAGTACTCGTGGAGGTTTCTCTGTTCCTCGCCGGGCGGCTGAAAAAGTGTTTCCTCCATTGGATTTCACTCAGCAGCCCCCTGCTCAAGAATTAATGGCCAGGGATCTTCATGACAATGAATGGAAATTTAGACATATATTTCGTGGGCAACCTAAAAGGCATCTCCTTACCACTGGATGGAGTGTTTTTGTGAGTGCTAAAAGGCTTGTTGCTGGAGATTCTGTGATCTTCATCTGGAATGAAAAGAATCAATTACTCCTTGGCATTCGACGCGCTAATCGACCGCAAACGATGATGCCTTCTTCAGTTTTATCATGTGATAGCATGCATTTGGGCCTTCTTGCTGCTGCCGCTCATGCAGCCGCAACAAATAGTCGATTCACCATATTTTATAACCCAAGGGCGAGCCCAACCGAATTTGTAATACCGTTTGCCAAGTACGTAAAGGCGGTCTACAACACTCGTGTTTCTGTTGGAATGCGGTTTAGGATGATGTTCGAAACAGAAGAATCAAGTGTTCGTCGCTACATGGGTACGATTACCGGGATTAGTGACTTGGATCCGCGGTGGGCAAATTCACATTGGCGCTCGGTCAAGGTTGGATGGGATGAGTCAACTGCAGGAGAGAGGCAGCCGAGAGTGTCGTTGTGGGAGATTGAACCATTGACGACGTTCCCAATGTATCCTCAGTTTTCCCTTCGGCTAAAGCGGCCATGGCCAGCTGGTTTACCCTCCTTCAATGGAATCAAAGAAAATGATCTGGGAATGAATTCTACCCACTTGTGGCTAGGTGGAGATAATGAATCTCTGAACTTTAGTGGAGGAGTTTCGCCATGGATACAACCTAGGCTTGATTCTTCCATGCTCGGTCTGCAATCTGATGTTTATCAATCCATGGCTGCTTCTGCAGCACTGGAGAAGATGAAGATGATAAACCCATCCAAATTACCTTTCCAATTTCAATATTCTCCTCAAGCTCATCCGGCCTTCCTTCCGACCACTGTGGAAAATGGACCTCAGGAGGCCTTCCTTCCAACTATGGTGCAAAACGGACCTGATTCTCAATCTCAGATTCAAACTCGGCCTCAAATTTTCCAGCAAAAGTTGCAGATTCCTAATGAAAGATTGGGGACTGATTCTTTTCATGGATTATTGAGTTCATTTACTCCAAATGAAGATGATTCATCTCATCTACTGAACCTTCAAAGAAATAATGGTCTGATTCCTTCTTCAACTTGGCCTTCTAAGCGGGCTGCTCTCAATCCTCTATTTCCATTTTTACTTCCTCAAGTAGAAGAAGAACATTTGGTGTCATTGCCACCATTTCCGGGTCGAGAGTGCTCGATCAATCAACAAAACCATCTGTTATATGGTTTGAATATCGAACCAAAAGGTTCACCATTTTGTTCTAATTTCATGGCTTCCAATGGTAGTGATTACCCCGATAATGGAGTAATAACACCTTCCACTTCCATTGACGATCCGGGATTCTTGTCTGCAAAAAACATGTCCCAAGAAGTCAACCCATCATCCAGAAACTTCGTCAAGGTGTATAAATCAGGGTCCTTAGGTAGATCATTGGACATTACCAAGTTTAATAGCTACCACGCTCTACGCAGTGAGCTCGCTCAAATGTTCAGCTTGGATAGCGTGTTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTGTATTCGTCGATCGGAAGAATGAAATTCTTCTCCTCGGTGATGACCCTTGGCCGGAGTTCTTGAATCACGTGTGGAGTATAAAAATATTGTCCCCTCAAGAAGTGCTCGAAATGGGAAAAGACAGTGCAAAGCTTTTGAATGCAGAATCGATTCAGAGGCTCTCAGTCGGAAGTTGCGACGAGAATGTGATCGGACAAAATTCGAGAAACGTGAGCAGCGTACTAACTTCCGGTGGGTCCATCGACAACTGA 2346 44.93 MRLSSAGFSPQSHEGEKKVLNSELWHACAGPLVSLPATGNRVVYFARGHSEQVTASTNKEVDTHISSYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSQQEQKETYLPAELGAPSKQPTNYFCKTLTASDTSTRGGFSVPRRAAEKVFPPLDFTQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTMMPSSVLSCDSMHLGLLAAAAHAAATNSRFTIFYNPRASPTEFVIPFAKYVKAVYNTRVSVGMRFRMMFETEESSVRRYMGTITGISDLDPRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPQFSLRLKRPWPAGLPSFNGIKENDLGMNSTHLWLGGDNESLNFSGGVSPWIQPRLDSSMLGLQSDVYQSMAASAALEKMKMINPSKLPFQFQYSPQAHPAFLPTTVENGPQEAFLPTMVQNGPDSQSQIQTRPQIFQQKLQIPNERLGTDSFHGLLSSFTPNEDDSSHLLNLQRNNGLIPSSTWPSKRAALNPLFPFLLPQVEEEHLVSLPPFPGRECSINQQNHLLYGLNIEPKGSPFCSNFMASNGSDYPDNGVITPSTSIDDPGFLSAKNMSQEVNPSSRNFVKVYKSGSLGRSLDITKFNSYHALRSELAQMFSLDSVLEDPLRSGWQLVFVDRKNEILLLGDDPWPEFLNHVWSIKILSPQEVLEMGKDSAKLLNAESIQRLSVGSCDENVIGQNSRNVSSVLTSGGSIDN 781
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10844578 10850005 - Bma011445.2 Bma14g00953 94934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00953 781 Gene3D - 644 737 - -
Bma14g00953 781 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Bma14g00953 781 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 603 759 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bma14g00953 781 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 484 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bma14g00953 781 Pfam Auxin response factor 253 335 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bma14g00953 781 SMART B3_2 127 229 IPR003340 GO:0003677
Bma14g00953 781 CDD B3_DNA 126 227 IPR003340 GO:0003677
Bma14g00953 781 ProSiteProfiles PB1 domain profile. 648 733 IPR000270 GO:0005515
Bma14g00953 781 SUPERFAMILY DNA-binding pseudobarrel domain 111 256 IPR015300 -
Bma14g00953 781 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Bma14g00953 781 PANTHER AUXIN RESPONSE FACTOR 6 603 759 - -
Bma14g00953 781 PANTHER AUXIN RESPONSE FACTOR 6 1 484 - -
Bma14g00953 781 Gene3D - 125 228 IPR015300 -
Bma14g00953 781 Gene3D - 291 362 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00773 Bma-Chr7:22588261 Bma14g00953 Bma-Chr14:10844578 0 dispersed
Bma11g00910 Bma-Chr11:36693230 Bma14g00953 Bma-Chr14:10844578 2.40E-114 dispersed
Bma14g00953 Bma-Chr14:10844578 Bma15g00074 Bma-Chr15:857350 2.02E-11 dispersed
Bma14g00953 Bma-Chr14:10844578 Bma14g01118 Bma-Chr14:14107748 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58352 PF02362 B3 2.20E-21 CL0405 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00953 - - zju:107414026 1025.77