Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00980 ATGATGTCAAAATCGTACACCAATCTTTTAGATCTAGCTTCTGGTAATTTTCCAGTAATGGGTCGCGAGAAAAAGCGACTTTCTCGAGTGATGACTGTTCCTGGGATTATATCGGAGCTTGACGATGATCAGGCCAACAGTGTGACCTCAGACGTTCCATCTTCCATTTTTCAGGACCGTATAATTATTGTTGGCAATCAGCTTCCTGTAAAAGCTAAACGAAGACCAGATAATAAGGGTTGGAGTTTCAGTTGGGATGAGGATTCATTGCTGTTACAGCTCAAGGATGGCTTACCTGAAGATATGGAGGTCTTATATGTTGGCTCTTTGAAAGTGGATGTAGATTCAAATGAGCAAGATGACGTTTCACAGATTTTATTGGAGAGGTTTAAGTGTGTTCCAGCTTTTTTACCTTCTGACATTTTGTCAAAGTTCTATCATGGATTTTGTAAGCAGCATTTATGGCCACTTTTCCATTATATGCTTCCTATTTCGGCTGATCATGGTGGACGATTCGATCGGTCTTTGTGGGAGGCGTATGTCGCAGCAAATAAGATTTTTTCGCAAAGGGTGATTGAAGTTATTAACCCAGATGATGACTACGTATGGATCCATGATTATCATTTAATGGTGCTTCCTACCTTCTTGAGGAGGAGGTTTAATAGATTGAGAATGGGATTTTTTCTTCACAGTCCATTTCCATCATCAGAGATATACCGGACTTTACCCGTGAGAGAAGAGATTCTCAAGGCTCTTTTAAATTCAGACCTTATTGGTTTCCACACTTTCGACTATGCTCGTCATTTCCTCTCTTGCTGTAGTCGGATGTTAGGATTAGAGTATCAATCAAAAAGAGGCTATATTGGTTTGGAATACTATGGTAGAACTGTCGGGATTAAGATCATGCCGGTTGGAATTCATATGGGCCAGATTGAGTCAGTGTTGAGACAGGCAGACAAGGAGTGGAGGTTAAGGGAGCTGAAACAACAGTTTGAAGGGAAAACTGTCTTGCTTGGAGTGGATGATATGGACATCTTTAAAGGTGTCAATCTGAAGTTGTTGGCAATGGAGCAAATGCTGAAACAGCATCCTAAGTGGCAGGGAAAGGCCGTGCTTGTGCAGATTGCAAATCCTGCTAGAGGAGGTGGAAAAGATCTAGTCGAAATACAGGATGAAATTGAGGCTAGCTGCAAGAGAATTAACGATCGTTTTCGACAAAAAAATTACGAACCAATAATTTTCATCGATAGGCCAGTTTCTCTCAGTGAAAGAGCGGCTTATTACATCATTGCCGAGTGTGTGGTAGTCACAGCTGTGAGGGATGGAATGAATCTAACACCTTATGAGTATATTCTCTGCAGACAGGGAATCTCTGGATCGAATATTAACCCCGAATCGAGTGGGCCCAAGAAGAGCATGCTAGTGGCATCGGAGTTTCTCGGATGTTCTCCTTCACTGAGCGGTGCAATTCGAATCAATCCGTGGAATATTGAAACAACTGCTGAGGCGATGAATGAGGCAATATCAATGGCTGATGCTGAGAAGCACTTGCGCCATGAGAAGCATTATAGGTACATTAGTACCCATGATGTATCGTACTGGTCGAAGAGCTTTTTCCAAGACATGGAGAGGACATGTAAGGACCATTTTAGAAAACGTTGCTGGGGAATTGGTTTGGGGTTTGGATTTAGAGTTGTTGCTCTAGATCCTAATTTCAGGAAATTATCCATTGATGTCATTGTGTCTGCATATTCAAAGTCGAAAAACAGGGCAATCTTATTGGATTATGATGGAACTGTCATGCCCCAAACGTCAATCAATAAGGCTCCAAGTCAGGAGGTCATCTCCATCATAAATACGCTCTGCGGTGACGATAAAAATACTGTTTTTGTTGTCAGCGGAAGAGGAAGACAGAGTTTAAGCAGATGGTTTTCTTCATGTCAAAAGCTAGGAATTGCTTCTGAGCATGGCTATTTCATGAGGTGGTCTGCGGAGGATGATTGGGAAAATTGTGGCCAAACAACTGATTTTGATTGGATACAAATGGCTGAGCCAGTTATGCAATTATACACCGACGCAACAGATGGTTCATCTATTGAAACCAAGGAAAGTGCTCTGGTTTGGCACCATCAAGATGCGGATCCTGGTTTTGGGTCAAGTCAAGCCAAAGAACTGTTGGACCACCTTGAAAGCGTATTGGCCAATGAGCCAGTAACTGTTAAAAGCGGCCAATTCATCGTCGAAGTAAAGCCACAGGGTGTGAGTAAAGGTTCAGTTGCAGCAAAGATCTTCACATCCATGGCGGAAAATGGAAGACAGGCAGATTTCGTTCTTTGCATTGGTGATGATCGATCTGATGAAGACATGTTTGAGATCATCGAAAGCGCATTCAATAATGGAGTGCCTCTCCTCTAA 2415 42.36 MMSKSYTNLLDLASGNFPVMGREKKRLSRVMTVPGIISELDDDQANSVTSDVPSSIFQDRIIIVGNQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVLYVGSLKVDVDSNEQDDVSQILLERFKCVPAFLPSDILSKFYHGFCKQHLWPLFHYMLPISADHGGRFDRSLWEAYVAANKIFSQRVIEVINPDDDYVWIHDYHLMVLPTFLRRRFNRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRQADKEWRLRELKQQFEGKTVLLGVDDMDIFKGVNLKLLAMEQMLKQHPKWQGKAVLVQIANPARGGGKDLVEIQDEIEASCKRINDRFRQKNYEPIIFIDRPVSLSERAAYYIIAECVVVTAVRDGMNLTPYEYILCRQGISGSNINPESSGPKKSMLVASEFLGCSPSLSGAIRINPWNIETTAEAMNEAISMADAEKHLRHEKHYRYISTHDVSYWSKSFFQDMERTCKDHFRKRCWGIGLGFGFRVVALDPNFRKLSIDVIVSAYSKSKNRAILLDYDGTVMPQTSINKAPSQEVISIINTLCGDDKNTVFVVSGRGRQSLSRWFSSCQKLGIASEHGYFMRWSAEDDWENCGQTTDFDWIQMAEPVMQLYTDATDGSSIETKESALVWHHQDADPGFGSSQAKELLDHLESVLANEPVTVKSGQFIVEVKPQGVSKGSVAAKIFTSMAENGRQADFVLCIGDDRSDEDMFEIIESAFNNGVPLL 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11404314 11407872 - Bma011473.1 Bma14g00980 94961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00980 804 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Bma14g00980 804 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Bma14g00980 804 Gene3D - 592 796 IPR023214 -
Bma14g00980 804 Gene3D Glycogen Phosphorylase B; 53 313 - -
Bma14g00980 804 TIGRFAM T6PP: trehalose-phosphatase 587 797 IPR003337 GO:0003824|GO:0005992
Bma14g00980 804 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 794 IPR006379 -
Bma14g00980 804 Gene3D Glycogen Phosphorylase B; 314 527 - -
Bma14g00980 804 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 801 IPR001830 GO:0003824|GO:0005992
Bma14g00980 804 Pfam Trehalose-phosphatase 593 796 IPR003337 GO:0003824|GO:0005992
Bma14g00980 804 SUPERFAMILY HAD-like 590 793 IPR036412 -
Bma14g00980 804 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Bma14g00980 804 CDD HAD_TPP 591 791 - -
Bma14g00980 804 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 7-RELATED 1 801 - -
Bma14g00980 804 Gene3D - 673 752 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00825 Bma14g00980 CCT
Bma07g00825 Bma14g00980 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00347 Bma-Chr1:2870672 Bma14g00980 Bma-Chr14:11404314 6.49E-08 dispersed
Bma07g00825 Bma-Chr7:26457853 Bma14g00980 Bma-Chr14:11404314 0 dispersed
Bma11g00990 Bma-Chr11:45085561 Bma14g00980 Bma-Chr14:11404314 0 dispersed
Bma14g00980 Bma-Chr14:11404314 Bma14g01762 Bma-Chr14:37920255 0 dispersed
Bma14g00980 Bma-Chr14:11404314 Bma05g00708 Bma-Chr5:41135268 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00980 K16055 - rcu:8275177 1467.98