Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01000 ATGGCTGAGGTAGAAACCAATCAAGATCATGCGCAAGGAATTAAGCTCTTTGGGAAAACAATCACGTTGCATGATAAGCAAGTAAAGGAAGGAGATAAAAGGGATGATGGTCAGACGGCGGAGAAGATGCCAGAAAAGATCATCCCTTGCCCTAGATGCAAGAGCATGGAGACTAAGTTCTGTTACTTCAACAACTATAACGTCAAGCAGCCTAGACATTTCTGCAAGGGTTGCCAGAGGTACTGGACGGCCGGAGGAGCTCTCCGGAACGTTCCCATCGGAGCTGGTCGCCGGAAAGCAAAACCACCTTGTCAAAACACCATAGGTGGGTTGCCGGGAAGTTACCTTCATGATCCCTCTTCGGTGGCCGTGCACCAGTTTCAATTAGATGGGGTGGTGGAGGATTGGAAAGTTATGATCAGCCATGGTAGTTTCCGGCAAGCTTTGCCGGTGAAGAGGCAGAGGGACGGCTGTGGAGGTCAAACTTGTTGA 492 49.8 MAEVETNQDHAQGIKLFGKTITLHDKQVKEGDKRDDGQTAEKMPEKIIPCPRCKSMETKFCYFNNYNVKQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPCQNTIGGLPGSYLHDPSSVAVHQFQLDGVVEDWKVMISHGSFRQALPVKRQRDGCGGQTC 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11645662 11646153 + Bma011499.1 Bma14g01000 94981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01000 163 Pfam Dof domain, zinc finger 46 101 IPR003851 GO:0003677|GO:0006355
Bma14g01000 163 PANTHER CYCLIC DOF FACTOR 2 8 160 IPR045174 GO:0003700|GO:0006355
Bma14g01000 163 ProSitePatterns Zinc finger Dof-type signature. 50 86 IPR003851 GO:0003677|GO:0006355
Bma14g01000 163 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 8 160 - -
Bma14g01000 163 ProSiteProfiles Zinc finger Dof-type profile. 48 102 IPR003851 GO:0003677|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma11g00999 Bma14g01000 CCT
Bma07g00840 Bma14g01000 CCT
Bma01g01447 Bma14g01000 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00840 Bma-Chr7:28305636 Bma14g01000 Bma-Chr14:11645662 1.00E-51 dispersed
Bma11g00999 Bma-Chr11:45383043 Bma14g01000 Bma-Chr14:11645662 1.04E-47 dispersed
Bma14g01000 Bma-Chr14:11645662 Bma14g01650 Bma-Chr14:34989554 1.51E-31 dispersed
Bma01g01447 Bma-Chr1:25011422 Bma14g01000 Bma-Chr14:11645662 5.52E-90 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58356 PF02701 zf-Dof 4.90E-32 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01000 - - zju:107410557 225.328