Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01027 ATGGTGATTTCGAGCTCTCTTTTCTTGCTTCTCTCTCTGTGCTGCACGGTCACTGCATCGTTTTGGAGTTTGGCTGATTCGGCTGACAGTATCTCTGCGAACGAGTTCATCAATGGAAGCCAAACGCTTGTTTCTTCTGGACAAAAGTTTGTATTAGGGTTTTTCTCTACTGAAGTTTCCAACTCTCAATATTTAGGAATATGGTATGATAAGATCCTCCCTCGGACTGTAGTTTGGGTGGCAAACAGAAACAATCCAGCTGTAAATTTATCTTCCAAGTTAAGTTTCGACGAAGATGGAAATCTAGTTCTTCAGAATCAAACGGGAGGCATTTTGTGGTCGACAAATTCGTCGAAAAGAGTGAAAAGTCCAGTCGTGAAGCTTTTAGATTCCGGAAATTTGGTTTTAGTGGATTCTGAAAGTGGAAATTCCGAGGATTATTCGTGGCAGAGCTTCGATTATCCGTCGGATACGCTACTACCAGGAATGAAACTAGGGTGGGACTTGAAACTCGGTTTTAATCGCGAACTAAGATCATGGAAAAGCTCCAACGATCCTTCTCCTGGCAATTTCTCTTACCGTATAGATTTACAAGGTCTTCCTCAAGTCGTTCTTGTTGATGGATCAACCAAACTTCTCAGAAGCGGTCCATGGATTGGGACCCGATTCAGCGGCGGGTTTGTTATAGGTCCAAACAGTGTATATCATCCCCAATTTATTTACAATTCCAGTGAAGTGTATTACACCTTTGATACAGTAGATGATAGATTTTCCCGAATGGTATTGTATCCAACTGGAATAGTTCAGCAATCCTACTGGGATGAAATACAAGGAAGGTGGATTGATCTATTTAAAATTCCATCAAATCGCTGCAATAACTATGACCATTGCGGCCACTATGGGAGCTGTTTTTTCAGTGATACTGCTTGGTGCAGCTGTTTGAGGGGATTCACACCTACAAATCCTCGAGATTGGGCACTTTACGAATGGTCCAAAGGGTGTGTTAGAAAGGATTTGAATATCTGCGAGAGTGGGGAAGGATTTGTGAAGATTAGTGGGGTCAAACTTCCAGATGCGGAATTTGGATTTGTTATTATTGACGTTGATGATTGCGAAGCAGAGTGTTTGAAGAATTGTTCTTGCAAAGCTTATGCCAGGTTAGATAGTACAGGCACTGACAATAGCTGCCTTTTCTGGTCTGGTGATTTGGTTGATATTAGAACCACTGACACTGGGCAAGATCTCTACATTAGAGCTGCAGCTTCAGAGTTGGAATCTGTGCCGGATGATAAGCGGAGAGTCGCTGTTCTTCTTGTAGCCGTGATTGTATCTGTTATTTCAGCCGTCATTTTTGTGTCTTTGATCAGCTGGTTTTTGATTAAGAAGAGAAGAAATGCTTCAAGAAATCAGGTTCCACCAGATGATCTCGAGACTCCTCTGATTGATATTGATGTCATTGAAGCTGCTACGCAGAAATTTTCGCTTTCCAACAAGATTGGAGAAGGTGGATTTGGACCTGTATACAAGGGTAAGCTTCAATCAGGACAAGAGGTTGCAGTAAAACGGCTATCTGAGAGTTCTGGGCAAGGAGTTCATGAGTTTAAAAATGAGGTTCTTTTGATCTCCCAACTTCAACATAGGAATCTTGTTCAGCTTCTGGGTTGCTGCATTCATAGAGAAGAGAGAATGTTAATCTATGAGTACATGCCAAACAAAAGTTTAGACTACTTCATCTTCGATGATGTGAGAAGATGTTCACTAGATTGGAAAAAACGAAAAAACATTATTGTCGGGATAGCTCGAGGGCTTCTCTATCTTCATAGAGATTCAAGATTGAGGATCATTCATAGAGATCTCAAAGCAAGTAACATCTTGTTAGACGAAGACATGAATCCAAAAATTTCAGATTTTGGCATGGCAAGAATGTTTGCTGGGGATCAAACTGCAACAAAAACAAAGAGAGTGGTCGGCACATATGGCTACATGTCCCCAGAATATGCAATCGAAGGATATTTTTCGTTCAAATCCGACGTTTTCAGCTTCGGAGTTATACTGGTGGAGATGGTAAGTGGACGGAAGAACAGAGGGTTCGTCCATCCAAATCACCAACTAAATCTCATTGGACATGCATGGAAGCTTTGGAAAGAAGGAAAAGCCTTGGAATTGATGGACGTAGTTTTTGAGAATCAATTTCCACCTTCTGAAGCATTGAAGTTCATTCAAATTGGTCTTCTGTGCGTTCAGCAGCGACGGGAGGAAAGACCGTTGATGTCGACAGTAGCAATGATGTTGGATGGTGATAATATGCAGTTGCCGGAGCCTGGCCGACCTGGGTTTTATACAGAGAGGAGCATCTCGGTCACTGATTCATCGCGAGGAAAATTGAGTTTCACTTTAAATGAGATTAGTCTGACTTTGCTAGAACCCCGATAA 2433 41.84 MVISSSLFLLLSLCCTVTASFWSLADSADSISANEFINGSQTLVSSGQKFVLGFFSTEVSNSQYLGIWYDKILPRTVVWVANRNNPAVNLSSKLSFDEDGNLVLQNQTGGILWSTNSSKRVKSPVVKLLDSGNLVLVDSESGNSEDYSWQSFDYPSDTLLPGMKLGWDLKLGFNRELRSWKSSNDPSPGNFSYRIDLQGLPQVVLVDGSTKLLRSGPWIGTRFSGGFVIGPNSVYHPQFIYNSSEVYYTFDTVDDRFSRMVLYPTGIVQQSYWDEIQGRWIDLFKIPSNRCNNYDHCGHYGSCFFSDTAWCSCLRGFTPTNPRDWALYEWSKGCVRKDLNICESGEGFVKISGVKLPDAEFGFVIIDVDDCEAECLKNCSCKAYARLDSTGTDNSCLFWSGDLVDIRTTDTGQDLYIRAAASELESVPDDKRRVAVLLVAVIVSVISAVIFVSLISWFLIKKRRNASRNQVPPDDLETPLIDIDVIEAATQKFSLSNKIGEGGFGPVYKGKLQSGQEVAVKRLSESSGQGVHEFKNEVLLISQLQHRNLVQLLGCCIHREERMLIYEYMPNKSLDYFIFDDVRRCSLDWKKRKNIIVGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGMARMFAGDQTATKTKRVVGTYGYMSPEYAIEGYFSFKSDVFSFGVILVEMVSGRKNRGFVHPNHQLNLIGHAWKLWKEGKALELMDVVFENQFPPSEALKFIQIGLLCVQQRREERPLMSTVAMMLDGDNMQLPEPGRPGFYTERSISVTDSSRGKLSFTLNEISLTLLEPR 810
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12023252 12028936 + Bma011530.3 Bma14g01027 95008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01027 810 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 22 808 - -
Bma14g01027 810 Gene3D Transferase(Phosphotransferase) domain 1 569 772 - -
Bma14g01027 810 SMART serkin_6 493 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g01027 810 CDD STKc_IRAK 499 766 - -
Bma14g01027 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 808 - -
Bma14g01027 810 Pfam S-locus glycoprotein domain 214 320 IPR000858 GO:0048544
Bma14g01027 810 SMART blect_4 34 155 IPR001480 -
Bma14g01027 810 Pfam D-mannose binding lectin 76 181 IPR001480 -
Bma14g01027 810 SUPERFAMILY Protein kinase-like (PK-like) 478 783 IPR011009 -
Bma14g01027 810 CDD PAN_AP_plant 342 418 - -
Bma14g01027 810 Pfam PAN-like domain 342 406 IPR003609 -
Bma14g01027 810 SMART ntp_6 343 419 IPR003609 -
Bma14g01027 810 Pfam Protein tyrosine and serine/threonine kinase 494 762 IPR001245 GO:0004672|GO:0006468
Bma14g01027 810 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Bma14g01027 810 ProSiteProfiles Protein kinase domain profile. 493 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g01027 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Bma14g01027 810 Pfam Domain of unknown function (DUF3403) 768 810 IPR021820 GO:0004674
Bma14g01027 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Bma14g01027 810 Gene3D Phosphorylase Kinase; domain 1 456 568 - -
Bma14g01027 810 Gene3D - 23 152 IPR036426 -
Bma14g01027 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 186 IPR036426 -
Bma14g01027 810 CDD B_lectin 34 155 IPR001480 -
Bma14g01027 810 ProSiteProfiles PAN/Apple domain profile. 342 420 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00603 Bma-Chr8:38037157 Bma14g01027 Bma-Chr14:12023252 3.68E-141 dispersed
Bma11g00360 Bma-Chr11:3887402 Bma14g01027 Bma-Chr14:12023252 7.31E-08 dispersed
Bma14g01027 Bma-Chr14:12023252 Bma14g01034 Bma-Chr14:12137319 0 dispersed
Bma14g01027 Bma-Chr14:12023252 Bma14g01028 Bma-Chr14:12065375 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66894 PF07714 PK_Tyr_Ser-Thr 6.60E-49 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01027 - - qsu:112035700 988.023