Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01033 ACTACAACTGCTGCCGCCACCTCCACCTTTATCGGGACCCGCCTCCCGGAGGTCCGTTCAAGCTCCGGCAGAGTGCAGGCTCGTTTCGGATTCGGGAAGAAAGGCCCGGGCAAGAAAGTGAAGAAGCCTAGTTTTGACCGTCCTCTTTGGTATCCTGGAGCTAAAGCGCCGGAATGGCTCGATGGGAGTTTTGTCGGAGATTACGGGTTCGACCCGTTTAATCTGGGAAAACCCGCCGAGTACTTGCAGTTCGATTTGGACTCTCTGGATCAAAACCTTGCAAAGAACGCGGCCGGAGATATAATCGGGACCAGATTTGAGAGTGCCGATGTGAAGTCCACTCCTTTCCAACCTTACTCCGAGGTTTTTGGGTTGCAGAGGTTCCGCGAGTGTGAACTTATCCATGGAAGATGGGCTATGTTGGCCACGCTCGGAGCCATTACTGTTGAGTGGCTCACCGGAGTCACCTGGCAAGACGCCGGAAAGGTCGAGCTAGTGGACGGGGCATCATACCTGGGCCAACCCCTTCCGTTCTCGATTTCGACATTGATATGGATCGAAGTTTTAGTCATTGGATACATCGAGTTTCAGAGAAACGCAGAGCTCGACCCTGAGAAGAGGCTCTACCCCGGAGGAAAATTCTTCGACCCATTAGGCTTGGCGGCCGATCCAGAGAAGAAGGAGAGGCTGCAGCTGGCGGAAATCAAGCACGCTCGGCTAGCCATGATCGGCTTCCTCGGGTTTGCCGTTCAGGCGGCGGCCACCGGGAAAGGTCCTCTTAACAACTGGGCCACCCATTTGAGCGATCCTCTCCATACCACCATTATCGACACATTTGCTTCC 843 54.57 TTTAAATSTFIGTRLPEVRSSSGRVQARFGFGKKGPGKKVKKPSFDRPLWYPGAKAPEWLDGSFVGDYGFDPFNLGKPAEYLQFDLDSLDQNLAKNAAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGASYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPEKKERLQLAEIKHARLAMIGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFAS 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12102495 12103435 + Bma030699 Bma14g01033 95014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01033 281 Gene3D Chlorophyll a/b binding protein domain 50 281 - -
Bma14g01033 281 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 1 279 - -
Bma14g01033 281 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 279 IPR001344 GO:0009765|GO:0016020
Bma14g01033 281 Pfam Chlorophyll A-B binding protein 56 252 IPR022796 -
Bma14g01033 281 SUPERFAMILY Chlorophyll a-b binding protein 43 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00334 Bma-Chr3:2489126 Bma14g01033 Bma-Chr14:12102495 4.97E-47 dispersed
Bma08g00942 Bma-Chr8:48421725 Bma14g01033 Bma-Chr14:12102495 2.25E-45 dispersed
Bma11g00895 Bma-Chr11:34032587 Bma14g01033 Bma-Chr14:12102495 9.06E-180 dispersed
Bma14g01033 Bma-Chr14:12102495 Bma01g02461 Bma-Chr1:82186277 1.03E-33 dispersed
Bma14g01033 Bma-Chr14:12102495 Bma14g01040 Bma-Chr14:12357473 4.09E-112 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01033 K08915 - csin:114287480 501.901