Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01040 ATGATGGCTGCCGCTACAACTGCTGCCGCCACCTCCACTTTTATCGGGACCCGCCTCCCGGAGGTCCGTTCAAGCTACGGCAGAGTGCAGGCGCGTTTCGGATTCGGGAAGAAAGGCCCGGGCAAGAAAGTGAAGAAGTCTAGTTTTGACCGTCCTCTGTGGTATCCTGGAGCTAAAGCGCCGGAATGGCTTGATGGGAGTTTTGTCGGAGATTACGGGTTCGACCCGTTTAATCTGGGAAAACCTGCCGAGTACTTGCAATTCGATTTGGACTCTCTGGATCAAAACCTTGCAAAGAACGCGGCCGGAGATATAATCGGGACCAGATTTGAGAGCGCCGATGTGAAGTCCACTCCTTTCCAACCTTACTCCGAGGTTTTTGGGTTGCAGAGATTCCGCGAGTGTGAACTTATCCATGGAAGATGGGCTATGTTGGCCACGCTCGGAGCCATTACTGTTGAGTGGCTCACCGGAGTCACCTGGCAAGACGCCGGAAAGGATATTGTCGTGATGAACTCTGAGTTGCTTTTCTTGACAAACAAATGGAAAATTCGTCTTCAATTGACGAAACCAGTTACTTGGCCTCCATTAGTCTGGGGAGTAGTCTGCGGAGCTGCAGCTTCTGGAAACTTTCAATGGAATTTAGAGGATGTAGCAAAGTCAATTGTTTGCATGGTGATGTCTGGTCCATTTCTAACTGGCTACACACAGACAATAAATGACTGGTATGACCGAGAACTTGATGCAATCAATGAACCTTATCGACCAATTCCTTCAGGCGCAATTTCTGAGAGCGAGGTGATTACTCAAATATGGGTGCTGCTACTGGGAGGACTTGGTTCGGCTGCTTTATTAGACGTGTGGGCAGGGCATGACACCCCAATAATTTTTTACCTTGCTCTTGGTGGATCTTTATTATCATACATATATTCTGCGCCACCTTTAAAGCTTAAACAAAATGGATGGATTGGAAATTTTGCCTTGGGAGCAAGTTATATTAGTTTGCCATGGTGGGCAGGCCAAGCTTTATTTGGAACTCTGACGCCTGACATAATTGTTCTCACACTCTTGTACAGCATAGCTGGTCTGGGCATTGCCATTGTGAACGACTTCAAAAGCGTCGAAGGTGACAGAGCTCTTGGACTTCAGTCAATTCCAGTGGCTTTTGGTGCTGAAACTGCTAAATGGATCTGTGTTGGCGCTATTGACATAACTCAGTTATCAGTGGCTGGTTATTTGCTTGGGGCTGGTAAGCCCTACTATGCTCTTGCCCTTCTTGCTTTGATAATTCCTCAAGTAGTCTTCCAGTTCCAATACTTCCTAAAGGACCCTGTGAAGTATGATGTTAAATATCAGGCCAGCGCTCAACCATTTCTTGTTCTGGGTCTATTAGTGACTGCTTTGGCGACAAGCCATTGA 1419 47.22 MMAAATTAAATSTFIGTRLPEVRSSYGRVQARFGFGKKGPGKKVKKSSFDRPLWYPGAKAPEWLDGSFVGDYGFDPFNLGKPAEYLQFDLDSLDQNLAKNAAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKDIVVMNSELLFLTNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFQWNLEDVAKSIVCMVMSGPFLTGYTQTINDWYDRELDAINEPYRPIPSGAISESEVITQIWVLLLGGLGSAALLDVWAGHDTPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSIPVAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIIPQVVFQFQYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12357473 12363620 + Bma011544.2 Bma14g01040 95021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01040 472 TIGRFAM chlor_syn_BchG: bacteriochlorophyll/chlorophyll synthetase 183 469 IPR006372 -
Bma14g01040 472 Pfam UbiA prenyltransferase family 195 443 IPR000537 GO:0016021|GO:0016765
Bma14g01040 472 TIGRFAM ChlG: chlorophyll synthase ChlG 179 472 IPR011799 GO:0015995|GO:0016021|GO:0046408
Bma14g01040 472 SUPERFAMILY Chlorophyll a-b binding protein 47 169 - -
Bma14g01040 472 PANTHER CHLOROPHYLL SYNTHASE, CHLOROPLASTIC 179 471 - -
Bma14g01040 472 PANTHER CHLOROPHYLL SYNTHASE 179 471 - -
Bma14g01040 472 CDD PT_UbiA_chlorophyll 185 467 IPR006372 -
Bma14g01040 472 Gene3D UbiA prenyltransferase 190 348 IPR044878 -
Bma14g01040 472 Pfam Chlorophyll A-B binding protein 60 176 IPR022796 -
Bma14g01040 472 Gene3D UbiA prenyltransferase 352 471 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00907 Bma-Chr6:44157307 Bma14g01040 Bma-Chr14:12357473 1.90E-08 dispersed
Bma14g01040 Bma-Chr14:12357473 Bma12g00374 Bma-Chr12:7192871 6.60E-11 dispersed
Bma14g01033 Bma-Chr14:12102495 Bma14g01040 Bma-Chr14:12357473 4.09E-112 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01040 K04040 - rcu:8283148 528.865