Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01050 GAAGCGTATGATGCACTTGATCCAAATGGAAACATCACTATCAAATGGGATATTATCAGTTGGACTGCTGATGGCTATGTTGCTATGGTGACAGTATACAATTTTCAGCAATATCGCCACATTCAAGCACCGGGTTGGTCGCTGGGATGGACGTGGGCGAAGAAGGAGGTAATCTGGAGTATGGTGGGAGGTCAGGCTACCGAGCAAGGAGATTGCTCGAGATTTAAGGGAAATATTCCACACTGCTGCAAAAAGGCCCCGACTGTTGTCGATCTTCTGCCGGGAACTCCTTACAATCAACAAGTAGCAAATTGTTGTAAAGCTGGAGTACTCTCCTCGTGGGTCCAAGATCCGGCCAACGCAGCTAGCTCGTTTCAGATCAGTGTCGGTTCTTCGGGAACCACCAATAAGACAGTGAGAGTGCCTAAGAACTTCACTTTGCAAGCGCCAGGGCCTGGTTATACTTGTGGACCTGGAAAGATAGTTAAACCAACTAAATTTATGTCTGCAGATAACAGAAGAGTCACACAAGCGTTGATGACATGGAATGTGACCTGCACATATTCGCAATTTCTGGCCCAGAGAACTCCTACTTGTTGTGTCTCATTCTCATCTTTCTACAATTCTACGATCGTCCCCTGTCCGACGTGTTCCTGTGGCTGCCAAAGCAATCTTAGCGAATCAGGGGGCTGTATCGGGGAAAATTCTTCATATTTAGCCTCAGTTGTTCAAGATTCTGGGCAAAATACTTCCCCTCTAGTTCAATGCACAAGCCATATGTGCCCAATTAGAGTTCATTGGCATGTCAAGCTCAACTACAAGGAATACTGGCGGGTTAAGATTACTGTCACGAACTTCAACTACCGGATGAACTATTCCGACTGGAATTTGGTTCTTCAACATCCCAACTTCGACAATCTGACCCAGATTTTCAGTTTCAACTATGAATCACTAAATCCTTATACAACAATAAATGATACTGGAATGCTGTGGGGAGTCAAGTTTTACAATGATTTTCTCATGGAAGCAGGCCCTCTCGGCAACGTGCAGTCGGAGCTACTCTTTCGTAAAGATTCAACCTTTACGTTCGACAAAGGCTGGGCTTTTCCTCGAAGGGTTTATTTTAACGATGATAACTGTGTCATGCCGCCTCCGGACGCCTATCCATGGCTACCAAATGCCAGTCCCGGCCTTGAAATTTCGTTTGTTACCTCCCTATTGACTTTTGTTTGTGCGTGGACAGTCATGTAC 1251 45.56 EAYDALDPNGNITIKWDIISWTADGYVAMVTVYNFQQYRHIQAPGWSLGWTWAKKEVIWSMVGGQATEQGDCSRFKGNIPHCCKKAPTVVDLLPGTPYNQQVANCCKAGVLSSWVQDPANAASSFQISVGSSGTTNKTVRVPKNFTLQAPGPGYTCGPGKIVKPTKFMSADNRRVTQALMTWNVTCTYSQFLAQRTPTCCVSFSSFYNSTIVPCPTCSCGCQSNLSESGGCIGENSSYLASVVQDSGQNTSPLVQCTSHMCPIRVHWHVKLNYKEYWRVKITVTNFNYRMNYSDWNLVLQHPNFDNLTQIFSFNYESLNPYTTINDTGMLWGVKFYNDFLMEAGPLGNVQSELLFRKDSTFTFDKGWAFPRRVYFNDDNCVMPPPDAYPWLPNASPGLEISFVTSLLTFVCAWTVMY 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12514934 12517105 - Bma030701 Bma14g01050 95031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01050 417 PANTHER PROTEIN COBRA 1 414 IPR006918 GO:0010215|GO:0031225
Bma14g01050 417 PANTHER COBRA-LIKE PROTEIN 1 414 - -
Bma14g01050 417 PIRSF COBRA 1 417 IPR006918 GO:0010215|GO:0031225
Bma14g01050 417 Pfam COBRA-like protein 26 189 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01050 Bma-Chr14:12514934 Bma14g01054 Bma-Chr14:12701215 2.26E-148 dispersed
Bma14g01050 Bma-Chr14:12514934 Bma14g01053 Bma-Chr14:12650933 8.03E-167 proximal
Bma04g00053 Bma-Chr4:500036 Bma14g01050 Bma-Chr14:12514934 9.46E-08 transposed
Bma05g00386 Bma-Chr5:12166793 Bma14g01050 Bma-Chr14:12514934 1.69E-53 transposed
Bma12g00957 Bma-Chr12:41509154 Bma14g01050 Bma-Chr14:12514934 0 transposed
Bma13g00189 Bma-Chr13:2230022 Bma14g01050 Bma-Chr14:12514934 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01050 - - nnu:104599627 757.288