Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01059 ATGTATCATTCTCCTCCATTTCCACTGCCTTATGATGCTGACCCAAGATATATCCGCCTGCAATGTGATAGGCTAGTTTTGACCCGTGAAAAGGGCTCGAGCCATTTGCACGGAGAATTGGAGCCTCTGAGAAGTGATATTGATATGGATATGGCTTTGAGGGCTGCTGACAAGTTGAATAGATCTACTGGTGAAGATGAATCTACAGACGAGTTGAGGAAGTTCTTGTTAAAATATTCTTCTGCGAAAAAATCCACTGCAGTTGAGAAAAATTATGCATTTTCGGAAGACGAGGATGTCTGTCCTACGTGTCTTGAAGAATATACTCCTGAAAATCCCAAGATTATGACCAAATGCTCTCATGATTTTCATCTTGGATGCATATATGAGTGGATGGAGAGAAGTGAAAGCTGCCCAGTTTGTGGGGAGGTATCATTCTTTATCCACCCTCTTTACTAG 459 41.83 MYHSPPFPLPYDADPRYIRLQCDRLVLTREKGSSHLHGELEPLRSDIDMDMALRAADKLNRSTGEDESTDELRKFLLKYSSAKKSTAVEKNYAFSEDEDVCPTCLEEYTPENPKIMTKCSHDFHLGCIYEWMERSESCPVCGEVSFFIHPLY 152
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 12803159 12803946 - Bma011564.1 Bma14g01059 95040
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01059 152 ProSiteProfiles Zinc finger RING-type profile. 101 141 IPR001841 -
Bma14g01059 152 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 147 - -
Bma14g01059 152 SUPERFAMILY RING/U-box 93 148 - -
Bma14g01059 152 SMART ring_2 101 141 IPR001841 -
Bma14g01059 152 Pfam RING-H2 zinc finger domain 98 141 IPR024766 GO:0008270
Bma14g01059 152 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 145 IPR013083 -
Bma14g01059 152 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 147 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01081 Bma-Chr1:11397018 Bma14g01059 Bma-Chr14:12803159 8.05E-64 dispersed
Bma06g01322 Bma-Chr6:50195810 Bma14g01059 Bma-Chr14:12803159 4.66E-33 dispersed
Bma14g00703 Bma-Chr14:7670777 Bma14g01059 Bma-Chr14:12803159 1.57E-19 dispersed
Bma14g01059 Bma-Chr14:12803159 Bma02g01189 Bma-Chr2:54008504 1.30E-09 dispersed
Bma01g01095 Bma-Chr1:11534859 Bma14g01059 Bma-Chr14:12803159 4.52E-64 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01059 - - zju:107416681 203.756