Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01088 ATGGATTTTCTTTCTCCGAGTTCTCCTCCTTCTGGTGTTCCTCCGACCACTTCTTCACCTCCATCTCCTTCAATTACTTCTGCACCTCCATCTCCGGTAACCACTTCTTCTCCTCCATCTCCATCAACCTCTTCTTTACCTCCTCCATCTCAGACCAATCAAACTACCGAACCTCCTTCTTCAGTCCCACCTCCTCAGTCACCACCAGCTTCTCCCCCTCCATCTCCTCCATCATCACCTCCACCTTCTGCGCCACTTCCTTCTTCTCCACCTCCTCCGCTGCTTGAATCTCCCCCACCGCCATCTACTCCGACATCTCCACTGCCATCACCTCCGATATCACAGTCTCCTCCGCCTCCTCCGACATCTTCACTTCCATCTGCACCACCATCACCTCCACCATTGGGTTCCAGTTCACCTCCTCCTCCTCCTCCAGACTTGTCACCACCACCTCCATCCAACAATTCTCCACCTCCCCAATCTCCACCTGATACTCCTCCTCAAAACATCTCACCTTCTGTGCCTCCTCCAGCAAATGACACAACACCAACTTCCTCAAATTTTCCACCTCCACCATCACAAAAGTCTCCAGAAAGATCTCCTCCACCTCCTAGACGCCATTCGCCTCCTCCCCCTCTGTCCCAATCTGAACCTCCGCCCGCCGCTTTCTCCCCAACATCTCCATTATTGCCTGACACTCCACCTTCAATTCCTTCATCATCTTCACCTCCTTCAGTTTCTCCTACTTCTCCAACTAATTCATCCAGCCAAAGTCCTACTATTTCACCATTACCTGAGAAATCAACTCCAGAGTCAACTCCAGGAAGTGATGTCACGGCCAATGGTTCATCTGGTGATGGGAAACAAAATTCTGGCCAGGTAGTGGCCATTGCAGTTGTAGTTGGGTTCATATTACTTAGTCTCATCGTCATGGGTGTATGGTTTGTGAAAAGACGGAAAAGAAGAAATAAATTGAAGAATATCAATTACACTCGCCCTTCTCCTTTTAATTCCTCACAAAATTCAGATTCATCATTTCTTAGGTCCCATTCCCCAGTAGCCTTGGTGGGAAGCCGTTTAGGCAGCGATTTCATGCATTCATCAACTGAGGCCGGTGGAATAAGCAATTCAAGAGGGTTCACATATGAGGACCTAGTCCAAGCTACAAATTCTTTTTCAGCCAAAAATATTTTGGGTGAAGGTGGATTTGGTTGTGTTTACAAAGGCACCCTCCCTGATGGAAGAGAAGTAGCAGTAAAGCAACTGAAAATTGGCGGTGGCCAAGGTGAACGTGAATTTAGAGCCGAGGTTGAAATTATTAGTCGAGTCCACCATCGCCATCTGGTTTCTCTTGTCGGTTATTGTATATCTGAATATCGGAGATTGCTTGTATATGATTATGTTCCAAACAATACTCTGCATTATCATCTCCATGCTCATAGTGCATTGGCTCTGGGTTGGGCAACGCGTGTTAGAATTGCCGCTGGTGCTGCTCGGGGGATTGCTTACCTACATGAAGACTGTAAGTTTCATCCTTCTTTCTGGACCTCTTCTGTGGTGGATTTGCTCTATTTATAG 1578 47.53 MDFLSPSSPPSGVPPTTSSPPSPSITSAPPSPVTTSSPPSPSTSSLPPPSQTNQTTEPPSSVPPPQSPPASPPPSPPSSPPPSAPLPSSPPPPLLESPPPPSTPTSPLPSPPISQSPPPPPTSSLPSAPPSPPPLGSSSPPPPPPDLSPPPPSNNSPPPQSPPDTPPQNISPSVPPPANDTTPTSSNFPPPPSQKSPERSPPPPRRHSPPPPLSQSEPPPAAFSPTSPLLPDTPPSIPSSSSPPSVSPTSPTNSSSQSPTISPLPEKSTPESTPGSDVTANGSSGDGKQNSGQVVAIAVVVGFILLSLIVMGVWFVKRRKRRNKLKNINYTRPSPFNSSQNSDSSFLRSHSPVALVGSRLGSDFMHSSTEAGGISNSRGFTYEDLVQATNSFSAKNILGEGGFGCVYKGTLPDGREVAVKQLKIGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEYRRLLVYDYVPNNTLHYHLHAHSALALGWATRVRIAAGAARGIAYLHEDCKFHPSFWTSSVVDLLYL 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13515480 13517946 + Bma011597.1 Bma14g01088 95069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01088 525 Pfam Protein tyrosine and serine/threonine kinase 394 511 IPR001245 GO:0004672|GO:0006468
Bma14g01088 525 ProSitePatterns Protein kinases ATP-binding region signature. 398 420 IPR017441 GO:0005524
Bma14g01088 525 ProSiteProfiles Protein kinase domain profile. 392 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g01088 525 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 124 509 - -
Bma14g01088 525 PRINTS Proline rich extensin signature 2 23 - -
Bma14g01088 525 PRINTS Proline rich extensin signature 65 90 - -
Bma14g01088 525 PRINTS Proline rich extensin signature 25 41 - -
Bma14g01088 525 PRINTS Proline rich extensin signature 46 63 - -
Bma14g01088 525 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 124 509 - -
Bma14g01088 525 Gene3D Transferase(Phosphotransferase) domain 1 375 519 - -
Bma14g01088 525 SUPERFAMILY Protein kinase-like (PK-like) 367 508 IPR011009 -
Bma14g01088 525 MobiDBLite consensus disorder prediction 8 245 - -
Bma14g01088 525 MobiDBLite consensus disorder prediction 246 290 - -
Bma14g01088 525 MobiDBLite consensus disorder prediction 1 290 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01088 Bma-Chr14:13515480 Bma15g00105 Bma-Chr15:1126644 1.22E-82 dispersed
Bma14g01088 Bma-Chr14:13515480 Bma15g00184 Bma-Chr15:1925429 2.32E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66898 PF07714 PK_Tyr_Ser-Thr 5.50E-19 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01088 - - pavi:110760087 317.775