Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01112 ATGGCACTGGCCAAAGAACCACGCATGGGCTTAGTTCAAACTCCAGACCTTTCTTCCCAAATCTCTTATGAAATGGCATCAGAAATGGGAAAAAATGGTGGGTTTGCAAAGAATACTGGTTTTTTGTTCTGCAGTTCAAACTATCAACCTGATGTTTCTCACTCTGTAATAAACTTCAAGAACCAGCTTGATCAGAATCTAATCCATTTAAGCACTGATTCATCTTTACTGAGTTTTGGTCAAACCCAACAATTAGCTCAAGATGATCATTTCAACTGGCCGGCAGAGGGAGAAAGCTTTGTCAATGGCTGTCAATGGAGTCAGATGATCAGTTCTCCTAGCTTACGCCTTTTGGAAGATTTGAACTGCTTCCAAAAAGCTTCTAACTTTACTCACATGGACAATCCTTCGAAAGAGAAGCAAAATGGATCAGATGGGTCTGGAAACTATTGGCTTTATTCTGAAGAATCGGATGTTATTGTTGAAGAAGAATCAAGAACAGCTCATGAAGAAAACCCCCATAAACGGCCCCATTTGATGGAAAGCGAGCAATCAATGAAGAAACAGTGCAATAATTCACCGAAGAAGACAACGCCAAAGACGAGTCCATCAAAGGATTCGCAAAGTATAGCAGCAAAGAATCGACGAGAGCGAATTAGCGATCGATTGAAGACTCTTCAAGAACTAGTACCCAATGGCTCCAAGGTTGATTTGGTGACTATGCTGGAGAAAGCAATTAGCTACGTCAAATTCCTCCAACTTCAAGTCAAGATTTTGGCTACAGATGAATTTTGGCCAGTTCAAGGAGGGAAAGCTCCTGATATTTCTCAAGTGAGAGAAGCCATTGATGCAATTCTTTCTTCTCAGGGAGACAGAAGCTCAAGCTCAAACAGTGCAATGCTTAGCAATGGAGGTTAA 918 41.29 MALAKEPRMGLVQTPDLSSQISYEMASEMGKNGGFAKNTGFLFCSSNYQPDVSHSVINFKNQLDQNLIHLSTDSSLLSFGQTQQLAQDDHFNWPAEGESFVNGCQWSQMISSPSLRLLEDLNCFQKASNFTHMDNPSKEKQNGSDGSGNYWLYSEESDVIVEEESRTAHEENPHKRPHLMESEQSMKKQCNNSPKKTTPKTSPSKDSQSIAAKNRRERISDRLKTLQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVREAIDAILSSQGDRSSSSNSAMLSNGG 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14007691 14009101 + Bma011626.1 Bma14g01112 95093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01112 305 MobiDBLite consensus disorder prediction 129 149 - -
Bma14g01112 305 MobiDBLite consensus disorder prediction 162 216 - -
Bma14g01112 305 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 35 290 - -
Bma14g01112 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 203 252 IPR011598 GO:0046983
Bma14g01112 305 MobiDBLite consensus disorder prediction 162 183 - -
Bma14g01112 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 202 262 IPR036638 GO:0046983
Bma14g01112 305 MobiDBLite consensus disorder prediction 184 209 - -
Bma14g01112 305 SMART finulus 209 258 IPR011598 GO:0046983
Bma14g01112 305 Pfam Helix-loop-helix DNA-binding domain 207 253 IPR011598 GO:0046983
Bma14g01112 305 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 35 290 - -
Bma14g01112 305 Gene3D - 198 260 IPR036638 GO:0046983
Bma14g01112 305 CDD bHLH_AtIND_like 204 266 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00230 Bma-Chr13:3365013 Bma14g01112 Bma-Chr14:14007691 3.83E-168 dispersed
Bma13g00231 Bma-Chr13:3387589 Bma14g01112 Bma-Chr14:14007691 1.62E-162 dispersed
Bma14g01112 Bma-Chr14:14007691 Bma04g00160 Bma-Chr4:1391143 7.65E-16 dispersed
Bma14g01112 Bma-Chr14:14007691 Bma05g00069 Bma-Chr5:2542258 2.10E-22 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58361 PF00010 HLH 1.30E-08 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01112 - - tcc:18601899 246.514