Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g01118 | ATGAAGCTTTCAACTTCAGGTTTTGGGCAGCAGGATCATGACGGAGGTGAGAAGAAGTGCTTAAATTCAGAGCTTTGGCATGCATGCGCGGGGCCCCTCGTGTCTCTCCCAACGGGTGGGACTCGTGTCGTCTACTTTCCTCAGGGTCACAGTGAGCAGGTTGCTGCCACGACCAACAAAGAAGTTGATGGGCACATACCCAATTATCCAAACTTACCGCCCCAGCTCATATGTCAGCTTCATAATGTCACAATGCATGCAGATGTGGAAACTGATGAAGTATATGCACAAATGACATTACAGCCGTTGACACCCCAAGAGCAGAAGGATACATTTCTTCCTATGGAGTTGGGGATCCCAAGCAAACAGCCCACCAACTATTTTTGCAAGACATTGACAGCAAGTGACACAAGCACTCATGGAGGTTTCTCTGTTCCTCGACGTGCCGCCGAAAAAGTTTTTCCCCCGCTGGATTTTTCACAACAGCCCCCAGCTCAAGAACTTAAAGCAAGAGACCTGCATGATGTTGAGTGGAAATTTAGGCACATTTTTCGAGGTCAGCCAAAACGTCATCTTCTTACAACTGGATGGAGCGTGTTTGTTAGTGCAAAAAGACTTGTTGCAGGAGATTCAGTTCTCTTTATCTGGAATGAAAAAAATCAGCTGCTATTGGGCATTCGCCGTGCCACGCGACCTCAAACTGTGATGCCATCATCTGTTCTCTCAAGTGACAGTATGCATATAGGACTTCTTGCCGCCGCGGCTCATGCTGCTGCAACAAATAGCTGTTTCACAGTTTTTTATAACCCTAGGGCTAGTCCATCTGAGTTTGTTATTCCTCTTTCAAAATATGTTAAAGCAGTATTTCATACACGTGTTTCTGTGGGGATGCGCTTTCGAATGCTGTTTGAGACAGAAGAGTCAAGTGTTCGAAGGTACATGGGTACAATTACAGGGATAAGTGACCTAGATCCTGTTCGTTGGCCTAATTCCCATTGGCGTTCTGTCAAGGTTGGTTGGGATGAATCGACTGCCGGTGATAGGCAACCAAGAGTATCTTTGTGGGAAATTGAGCCATTGACAACGTTTCCCATGTATCCTTCTCTTTTTCCACTCAGACTAAAACGTCCATGGCATCCTGGGGCCTCATCATTGCTGGATGCCAGAGAAGATGCAGCTAATGGGCTCATGTGGCTAAGAGGGGGAACAGGGGAACAAGGTCTACACTCTCTCAATTTTCAGTCTGTTGGTATGTTTCCCTGGTTGCAGCAAAGACTTGACTCGCCATTGCTTGTATCGGATCATAATCAGCCTTACCAGACCATGCTGGCGGCTGGTATGCAGAACCTTGGAAGTGGAGATCTTCTAAGACAGCAAATGATCCACCTTCAACAGCCTTTCCACTATCTTCAGCAGCCTAACAGTCATAATTCGCTTATGCAAATGCCACAGCAATCGCAGCAGCAGATGGGTCAACAATCCGTGCTTCCTAGTGCCCAGCAACAATCACAACCATTGGCAGAGAATTTACCCCAGCACTTCTTACAGCAAACATTAAATAATCAATCCGAGCAACAGCCAAATCAGCAATCACACCCTTATCATACGGCTCTTCAGGCTCAGAGCACCCAGCTTCATCAAGGTCAGCAATCAAATGTGCCTTCGCCAACATTTCCTGGAACAGACTTTATGGATTCGAGCACCAAATTCTCTGCTTCTATGTCCCCGAGGCAAAACGTGCTTGGTTCATCATGTCCCGATACTGGTGGCAGTTTCTCACACTTATATCGAGGTCAGTCTGGGATATCAGAGCACTCATCCCATCAATCATCCACTTCCAAGTATGGTCATTCTCATGTCAATGTTCAAACTAATATTCCTTCATTTCCTGGGAGAGACTCTATGGTGGAGCTGAGGAATTGTAACTCGGAGTCACCCAATCCCATTGTTTTTGGTGTGAATATTGATTCCTCGGGGCTTCTACTTCCCAGTGTCCCGAATTTTGCCTCGCATTCAATTGATGCTGATTCCTCCACCATGCCATTAGGGGATTCTGGATTTCAAAGTTCCCTGTATGGTTGTGTCCAAGACTCTTCTGAGCTATTACGCAGTTCGGAGCAAGTTGATCCACCAACGCCCACCCAAACGTTCGTGAAGGTTTACAAGTCGGGATCAGTTGGACGCTCTCTTGACATCTCCCGGTTCAACAGCTACCATGAGTTGCGGGAGGAGTTGGCTCAGATGTTTGGCATTGAGGGAAAGTTGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGCGCTTCTCCTTGGAGATGACCCGTGGGAGGCATTTGTGAACAACGTTTGGTATATCAAAATACTTTCACCTGAAGATTTTCAGAAAATGGGGGAGCAGGCGAATGAATCATTCGGCACAAATATAGGTCATCAGCGGCCGAATAGTAGCGGTGGGGAAGCTCACTCTGGGTTTCCATCTCTCGGCCCCCTGGAATACTAA | 2520 | 47.02 | MKLSTSGFGQQDHDGGEKKCLNSELWHACAGPLVSLPTGGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELKARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGASSLLDAREDAANGLMWLRGGTGEQGLHSLNFQSVGMFPWLQQRLDSPLLVSDHNQPYQTMLAAGMQNLGSGDLLRQQMIHLQQPFHYLQQPNSHNSLMQMPQQSQQQMGQQSVLPSAQQQSQPLAENLPQHFLQQTLNNQSEQQPNQQSHPYHTALQAQSTQLHQGQQSNVPSPTFPGTDFMDSSTKFSASMSPRQNVLGSSCPDTGGSFSHLYRGQSGISEHSSHQSSTSKYGHSHVNVQTNIPSFPGRDSMVELRNCNSESPNPIVFGVNIDSSGLLLPSVPNFASHSIDADSSTMPLGDSGFQSSLYGCVQDSSELLRSSEQVDPPTPTQTFVKVYKSGSVGRSLDISRFNSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDALLLGDDPWEAFVNNVWYIKILSPEDFQKMGEQANESFGTNIGHQRPNSSGGEAHSGFPSLGPLEY | 839 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 14107748 | 14115774 | - | Bma011633.1 | Bma14g01118 | 95099 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g01118 | 839 | SUPERFAMILY | CAD & PB1 domains | 707 | 789 | - | - | |
Bma14g01118 | 839 | Pfam | B3 DNA binding domain | 128 | 229 | IPR003340 | GO:0003677 | |
Bma14g01118 | 839 | Gene3D | - | 126 | 230 | IPR015300 | - | |
Bma14g01118 | 839 | Gene3D | - | 712 | 804 | - | - | |
Bma14g01118 | 839 | MobiDBLite | consensus disorder prediction | 810 | 828 | - | - | |
Bma14g01118 | 839 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 1 | 815 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bma14g01118 | 839 | SMART | B3_2 | 128 | 230 | IPR003340 | GO:0003677 | |
Bma14g01118 | 839 | MobiDBLite | consensus disorder prediction | 480 | 505 | - | - | |
Bma14g01118 | 839 | ProSiteProfiles | PB1 domain profile. | 715 | 799 | IPR000270 | GO:0005515 | |
Bma14g01118 | 839 | MobiDBLite | consensus disorder prediction | 540 | 617 | - | - | |
Bma14g01118 | 839 | CDD | B3_DNA | 127 | 228 | IPR003340 | GO:0003677 | |
Bma14g01118 | 839 | SUPERFAMILY | DNA-binding pseudobarrel domain | 112 | 257 | IPR015300 | - | |
Bma14g01118 | 839 | MobiDBLite | consensus disorder prediction | 810 | 839 | - | - | |
Bma14g01118 | 839 | ProSiteProfiles | B3 DNA-binding domain profile. | 128 | 230 | IPR003340 | GO:0003677 | |
Bma14g01118 | 839 | Pfam | Auxin response factor | 254 | 337 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Bma14g01118 | 839 | PANTHER | AUXIN RESPONSE FACTOR 8 | 1 | 815 | - | - | |
Bma14g01118 | 839 | Pfam | AUX/IAA family | 712 | 798 | IPR033389 | - | |
Bma14g01118 | 839 | Gene3D | - | 292 | 364 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma11g00426 | Bma14g01118 | CCT | |
Bma07g00399 | Bma14g01118 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00399 | Bma-Chr7:4889574 | Bma14g01118 | Bma-Chr14:14107748 | 1.80E-96 | dispersed | |
Bma11g00426 | Bma-Chr11:4591491 | Bma14g01118 | Bma-Chr14:14107748 | 4.00E-95 | dispersed | |
Bma07g00773 | Bma-Chr7:22588261 | Bma14g01118 | Bma-Chr14:14107748 | 0 | transposed | |
Bma14g00953 | Bma-Chr14:10844578 | Bma14g01118 | Bma-Chr14:14107748 | 0 | transposed | |
Bma15g00074 | Bma-Chr15:857350 | Bma14g01118 | Bma-Chr14:14107748 | 6.66E-14 | transposed | |
Bma13g00299 | Bma-Chr13:5364040 | Bma14g01118 | Bma-Chr14:14107748 | 5.02E-32 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58362 | PF02309 | AUX_IAA | 8.50E-08 | CL0072 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g01118 | - | - | csv:101208098 | 1340.48 |