Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01118 ATGAAGCTTTCAACTTCAGGTTTTGGGCAGCAGGATCATGACGGAGGTGAGAAGAAGTGCTTAAATTCAGAGCTTTGGCATGCATGCGCGGGGCCCCTCGTGTCTCTCCCAACGGGTGGGACTCGTGTCGTCTACTTTCCTCAGGGTCACAGTGAGCAGGTTGCTGCCACGACCAACAAAGAAGTTGATGGGCACATACCCAATTATCCAAACTTACCGCCCCAGCTCATATGTCAGCTTCATAATGTCACAATGCATGCAGATGTGGAAACTGATGAAGTATATGCACAAATGACATTACAGCCGTTGACACCCCAAGAGCAGAAGGATACATTTCTTCCTATGGAGTTGGGGATCCCAAGCAAACAGCCCACCAACTATTTTTGCAAGACATTGACAGCAAGTGACACAAGCACTCATGGAGGTTTCTCTGTTCCTCGACGTGCCGCCGAAAAAGTTTTTCCCCCGCTGGATTTTTCACAACAGCCCCCAGCTCAAGAACTTAAAGCAAGAGACCTGCATGATGTTGAGTGGAAATTTAGGCACATTTTTCGAGGTCAGCCAAAACGTCATCTTCTTACAACTGGATGGAGCGTGTTTGTTAGTGCAAAAAGACTTGTTGCAGGAGATTCAGTTCTCTTTATCTGGAATGAAAAAAATCAGCTGCTATTGGGCATTCGCCGTGCCACGCGACCTCAAACTGTGATGCCATCATCTGTTCTCTCAAGTGACAGTATGCATATAGGACTTCTTGCCGCCGCGGCTCATGCTGCTGCAACAAATAGCTGTTTCACAGTTTTTTATAACCCTAGGGCTAGTCCATCTGAGTTTGTTATTCCTCTTTCAAAATATGTTAAAGCAGTATTTCATACACGTGTTTCTGTGGGGATGCGCTTTCGAATGCTGTTTGAGACAGAAGAGTCAAGTGTTCGAAGGTACATGGGTACAATTACAGGGATAAGTGACCTAGATCCTGTTCGTTGGCCTAATTCCCATTGGCGTTCTGTCAAGGTTGGTTGGGATGAATCGACTGCCGGTGATAGGCAACCAAGAGTATCTTTGTGGGAAATTGAGCCATTGACAACGTTTCCCATGTATCCTTCTCTTTTTCCACTCAGACTAAAACGTCCATGGCATCCTGGGGCCTCATCATTGCTGGATGCCAGAGAAGATGCAGCTAATGGGCTCATGTGGCTAAGAGGGGGAACAGGGGAACAAGGTCTACACTCTCTCAATTTTCAGTCTGTTGGTATGTTTCCCTGGTTGCAGCAAAGACTTGACTCGCCATTGCTTGTATCGGATCATAATCAGCCTTACCAGACCATGCTGGCGGCTGGTATGCAGAACCTTGGAAGTGGAGATCTTCTAAGACAGCAAATGATCCACCTTCAACAGCCTTTCCACTATCTTCAGCAGCCTAACAGTCATAATTCGCTTATGCAAATGCCACAGCAATCGCAGCAGCAGATGGGTCAACAATCCGTGCTTCCTAGTGCCCAGCAACAATCACAACCATTGGCAGAGAATTTACCCCAGCACTTCTTACAGCAAACATTAAATAATCAATCCGAGCAACAGCCAAATCAGCAATCACACCCTTATCATACGGCTCTTCAGGCTCAGAGCACCCAGCTTCATCAAGGTCAGCAATCAAATGTGCCTTCGCCAACATTTCCTGGAACAGACTTTATGGATTCGAGCACCAAATTCTCTGCTTCTATGTCCCCGAGGCAAAACGTGCTTGGTTCATCATGTCCCGATACTGGTGGCAGTTTCTCACACTTATATCGAGGTCAGTCTGGGATATCAGAGCACTCATCCCATCAATCATCCACTTCCAAGTATGGTCATTCTCATGTCAATGTTCAAACTAATATTCCTTCATTTCCTGGGAGAGACTCTATGGTGGAGCTGAGGAATTGTAACTCGGAGTCACCCAATCCCATTGTTTTTGGTGTGAATATTGATTCCTCGGGGCTTCTACTTCCCAGTGTCCCGAATTTTGCCTCGCATTCAATTGATGCTGATTCCTCCACCATGCCATTAGGGGATTCTGGATTTCAAAGTTCCCTGTATGGTTGTGTCCAAGACTCTTCTGAGCTATTACGCAGTTCGGAGCAAGTTGATCCACCAACGCCCACCCAAACGTTCGTGAAGGTTTACAAGTCGGGATCAGTTGGACGCTCTCTTGACATCTCCCGGTTCAACAGCTACCATGAGTTGCGGGAGGAGTTGGCTCAGATGTTTGGCATTGAGGGAAAGTTGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGCGCTTCTCCTTGGAGATGACCCGTGGGAGGCATTTGTGAACAACGTTTGGTATATCAAAATACTTTCACCTGAAGATTTTCAGAAAATGGGGGAGCAGGCGAATGAATCATTCGGCACAAATATAGGTCATCAGCGGCCGAATAGTAGCGGTGGGGAAGCTCACTCTGGGTTTCCATCTCTCGGCCCCCTGGAATACTAA 2520 47.02 MKLSTSGFGQQDHDGGEKKCLNSELWHACAGPLVSLPTGGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELKARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGASSLLDAREDAANGLMWLRGGTGEQGLHSLNFQSVGMFPWLQQRLDSPLLVSDHNQPYQTMLAAGMQNLGSGDLLRQQMIHLQQPFHYLQQPNSHNSLMQMPQQSQQQMGQQSVLPSAQQQSQPLAENLPQHFLQQTLNNQSEQQPNQQSHPYHTALQAQSTQLHQGQQSNVPSPTFPGTDFMDSSTKFSASMSPRQNVLGSSCPDTGGSFSHLYRGQSGISEHSSHQSSTSKYGHSHVNVQTNIPSFPGRDSMVELRNCNSESPNPIVFGVNIDSSGLLLPSVPNFASHSIDADSSTMPLGDSGFQSSLYGCVQDSSELLRSSEQVDPPTPTQTFVKVYKSGSVGRSLDISRFNSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDALLLGDDPWEAFVNNVWYIKILSPEDFQKMGEQANESFGTNIGHQRPNSSGGEAHSGFPSLGPLEY 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14107748 14115774 - Bma011633.1 Bma14g01118 95099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01118 839 SUPERFAMILY CAD & PB1 domains 707 789 - -
Bma14g01118 839 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Bma14g01118 839 Gene3D - 126 230 IPR015300 -
Bma14g01118 839 Gene3D - 712 804 - -
Bma14g01118 839 MobiDBLite consensus disorder prediction 810 828 - -
Bma14g01118 839 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 815 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bma14g01118 839 SMART B3_2 128 230 IPR003340 GO:0003677
Bma14g01118 839 MobiDBLite consensus disorder prediction 480 505 - -
Bma14g01118 839 ProSiteProfiles PB1 domain profile. 715 799 IPR000270 GO:0005515
Bma14g01118 839 MobiDBLite consensus disorder prediction 540 617 - -
Bma14g01118 839 CDD B3_DNA 127 228 IPR003340 GO:0003677
Bma14g01118 839 SUPERFAMILY DNA-binding pseudobarrel domain 112 257 IPR015300 -
Bma14g01118 839 MobiDBLite consensus disorder prediction 810 839 - -
Bma14g01118 839 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Bma14g01118 839 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bma14g01118 839 PANTHER AUXIN RESPONSE FACTOR 8 1 815 - -
Bma14g01118 839 Pfam AUX/IAA family 712 798 IPR033389 -
Bma14g01118 839 Gene3D - 292 364 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma11g00426 Bma14g01118 CCT
Bma07g00399 Bma14g01118 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00399 Bma-Chr7:4889574 Bma14g01118 Bma-Chr14:14107748 1.80E-96 dispersed
Bma11g00426 Bma-Chr11:4591491 Bma14g01118 Bma-Chr14:14107748 4.00E-95 dispersed
Bma07g00773 Bma-Chr7:22588261 Bma14g01118 Bma-Chr14:14107748 0 transposed
Bma14g00953 Bma-Chr14:10844578 Bma14g01118 Bma-Chr14:14107748 0 transposed
Bma15g00074 Bma-Chr15:857350 Bma14g01118 Bma-Chr14:14107748 6.66E-14 transposed
Bma13g00299 Bma-Chr13:5364040 Bma14g01118 Bma-Chr14:14107748 5.02E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58362 PF02309 AUX_IAA 8.50E-08 CL0072 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01118 - - csv:101208098 1340.48