Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01163 CTTTCGCTTCTTCTTCTACTTCATGAAAACTCTAAGCCATTAAAGTTTATATTTTTATCCACAAAGCTTTCATTCATGGCTTCTATGAACTGGCTTGGTTTCTCTCTTTCTCCCCAGGAGTTTTCTTCTCAAGCATGTGAAGATCATTCTGCCCAAAGCTCGGTTTCCCGCCTCGGATTCGACTCCGATGAAATCTCCGGCCATGTCTCCGGCGACTGCTTCGATCACTCTTCTACTCCCTCTCTTATTCTCCCTCCTCCTTTTGGACTTCTTGAATCTTACAACCATCGCCCCAATCAATCTCAAGATTGGAACTTTAAGAGTACGGCGATGAACTCTGACAACAACTACAAAGAAAACTCGTCAGAACTTTCAATATTAATGGCTACCACTTCATGCAGCAGCCGAAACATCGAAACCCATCATCAACCGAAGCTCGAAAACTTTCTCGGCCGCGAAAATCCAAACTCCTTCATATACGCAGCAAATGCGGCGATCGGAGATGGAGGTGACGGTGGAGCTAATGGCAGTAGTGTTAATAGTAGCTCTATTGGGTTGTCAATGATAAAGACATGGCTACGAAGCCAACCAACACATTCCATTGCAGAGAATAAGAACGATGATGGCGGATCAAAAACCAGAAATGCACAAAGTTTGTCACTTTCTATGAGCACTGGTTCTAGTTCGCCATTGCTCCAAACTAGCTCTGCCGGAAATGGTGGTGGGGATAGTTCTTCGTCGGAGAATAAGCAAATTAAGACTTCATCCGGTATGGATGCCAAAAATGGCGCCATTGAAGGTGTGCCAAGAAAGTCCATGGATACATTTGGACAAAGAACTTCTATTTATCGTGGCGTAACAAGGCATAGATGGACGGGTAGATACGAGGCTCATCTGTGGGACAACAGTTGCAGAAGAGAAGGACAAACTAGGAAAGGAAGACAAGGAGGTTATGATAAAGAAGATAAAGCAGCAAGAGCATATGATTTAGCAGCACTTAAATATTGGGGTACCACTACTACTACAAATTTCCCAATTAGCAGCTACGAAAAAGAAATAGAAGAAATGAAGCACATGACGAGACAAGAATACGTGGCATCTCTTAGAAGGAAGAGTAGTGGGTTTTCTCGAGGAGCTTCGATTTATCGTGGAGTAACGAGACACCATCAACATGGACGATGGCAAGCAAGGATTGGAAGAGTTGCAGGAAACAAAGACCTATATTTAGGAACTTTCAGCACTCAAGAGGAAGCTGCAGAGGCTTACGACATTGCAGCCATAAAGTTCAGGGGGCTAAATGCTGTGACAAACTTTGATATGAACAGATATGATGTAAAATCAATCTTGGAAAGCAGTACTCTCCCCATTGGAGGAGCCTCAAAGAGATTGAAAGATGTTGATCAGGCTGAGATCATGTCCGTCGACGGACTAAGAACTGACGAAGAATCCATTTCTCAACTCACCGACCAAGGAATGGGCGGCTACGGCAGCTTGAACCACCATCCCTGGCTGGGTTTTTCCTTCCAACAAGCTCGGTTTCAGCCCTACAATGGCTTCCACCACCCTTATGGTCAAAGGGGTTGGTGTAAGCAAGAGCAAGACTCCGAGGTGGTCTCCCATGGCTTCCATGATCTTCACCAGCTTCAAACTGGAAACACCCACAATTTCTTTCAGAATAATTCTTCTCTGCATAATCTGACAGCGATGGATTCTTCCTCAATGGAGCATAGTTCTGGTTCTAACTCCATTCTTTACAGCAATGGAGGCGGAGGAGACGGAGGAAATAACAACAGTAATGGCGGAGTTATCGGATATGGAAGCTGCAACAATGGCGGCGGATATGGGATTCCGGTCGGAACAACGATAATTTCAAATGATCATGAAAATGGCGGTGGAGGGTACGAGAATCTTTTTGGAAATTCAGTGGATCCTTATCAGGGAAGGAACTTGTATTGTCTATCGCAACAATCACCAGTATCAACGGCTGTGATTAAACCTAGCGCATATGATCAAGGGTCAGCGTGCAACAACTGGGTCCCAACTGCAGTTCCAACCCTAGCTCCGAGGTCTCCTAACATGGCTGTCTGTCATGGAACTCCAGCTTTCACCATTTGGAATGACTCCTAG 2127 44.99 LSLLLLLHENSKPLKFIFLSTKLSFMASMNWLGFSLSPQEFSSQACEDHSAQSSVSRLGFDSDEISGHVSGDCFDHSSTPSLILPPPFGLLESYNHRPNQSQDWNFKSTAMNSDNNYKENSSELSILMATTSCSSRNIETHHQPKLENFLGRENPNSFIYAANAAIGDGGDGGANGSSVNSSSIGLSMIKTWLRSQPTHSIAENKNDDGGSKTRNAQSLSLSMSTGSSSPLLQTSSAGNGGGDSSSSENKQIKTSSGMDAKNGAIEGVPRKSMDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEDKAARAYDLAALKYWGTTTTTNFPISSYEKEIEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESSTLPIGGASKRLKDVDQAEIMSVDGLRTDEESISQLTDQGMGGYGSLNHHPWLGFSFQQARFQPYNGFHHPYGQRGWCKQEQDSEVVSHGFHDLHQLQTGNTHNFFQNNSSLHNLTAMDSSSMEHSSGSNSILYSNGGGGDGGNNNSNGGVIGYGSCNNGGGYGIPVGTTIISNDHENGGGGYENLFGNSVDPYQGRNLYCLSQQSPVSTAVIKPSAYDQGSACNNWVPTAVPTLAPRSPNMAVCHGTPAFTIWNDS 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 16921957 16926158 + Bma011711.1 Bma14g01163 95144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01163 708 MobiDBLite consensus disorder prediction 211 258 - -
Bma14g01163 708 PRINTS Ethylene responsive element binding protein signature 283 294 IPR001471 GO:0003700|GO:0006355
Bma14g01163 708 PRINTS Ethylene responsive element binding protein signature 421 441 IPR001471 GO:0003700|GO:0006355
Bma14g01163 708 PANTHER BNAC02G44180D PROTEIN 29 706 - -
Bma14g01163 708 SMART rav1_2 282 351 IPR001471 GO:0003700|GO:0006355
Bma14g01163 708 SMART rav1_2 381 445 IPR001471 GO:0003700|GO:0006355
Bma14g01163 708 Pfam AP2 domain 381 431 IPR001471 GO:0003700|GO:0006355
Bma14g01163 708 Pfam AP2 domain 282 337 IPR001471 GO:0003700|GO:0006355
Bma14g01163 708 CDD AP2 281 347 IPR001471 GO:0003700|GO:0006355
Bma14g01163 708 ProSiteProfiles AP2/ERF domain profile. 381 439 IPR001471 GO:0003700|GO:0006355
Bma14g01163 708 SUPERFAMILY DNA-binding domain 380 440 IPR016177 GO:0003677
Bma14g01163 708 SUPERFAMILY DNA-binding domain 281 347 IPR016177 GO:0003677
Bma14g01163 708 Gene3D AP2/ERF domain 381 441 IPR036955 GO:0003700|GO:0006355
Bma14g01163 708 Gene3D AP2/ERF domain 282 347 IPR036955 GO:0003700|GO:0006355
Bma14g01163 708 MobiDBLite consensus disorder prediction 200 273 - -
Bma14g01163 708 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 29 706 - -
Bma14g01163 708 CDD AP2 380 439 IPR001471 GO:0003700|GO:0006355
Bma14g01163 708 ProSiteProfiles AP2/ERF domain profile. 282 345 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02230 Bma-Chr1:79307280 Bma14g01163 Bma-Chr14:16921957 2.64E-90 dispersed
Bma07g00696 Bma-Chr7:14932798 Bma14g01163 Bma-Chr14:16921957 5.80E-122 dispersed
Bma13g01218 Bma-Chr13:45455279 Bma14g01163 Bma-Chr14:16921957 9.06E-82 dispersed
Bma14g00780 Bma-Chr14:8728576 Bma14g01163 Bma-Chr14:16921957 9.71E-120 dispersed
Bma14g01163 Bma-Chr14:16921957 Bma14g01196 Bma-Chr14:17721162 0 dispersed
Bma15g01104 Bma-Chr15:43913640 Bma14g01163 Bma-Chr14:16921957 5.49E-21 dispersed
Bma14g01163 Bma-Chr14:16921957 Bma07g01409 Bma-Chr7:49858960 6.30E-126 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58364 PF00847 AP2 2.40E-08 CL0081 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01163 K09285 - qsu:111984882 842.417