Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01167 ATGTTCTTAAAGATCGCTGAATACAAAGCCGGCATCGTCCCGATCCAATTCCGGAAAAGTCCCTGCGCGAAGAGCGGAGGTATCAAATTCGAGATCAACGGAAACCCTAATTTTCTGCTCGTTTTGGTTTTCAACGTCGGAGGTGCCGGCGACGTTGTTGACGTGAAAGTCAAGGGATCCAACACCAACTGGTTGCAGATGAACCGTAATTGGGGCGACAAGTGGGACAACGGCACACCATTGGTAGGGCAGAGCTTGTCGTTCCGGGTGACTACTAGCGACGGGAGGTCGGTGGAATGCGACAATGTCGCTCCGGCTAGTTGGCAATACGGCCAGACCTATGAATCAAGTACCAATTTCTAG 363 51.52 MFLKIAEYKAGIVPIQFRKSPCAKSGGIKFEINGNPNFLLVLVFNVGGAGDVVDVKVKGSNTNWLQMNRNWGDKWDNGTPLVGQSLSFRVTTSDGRSVECDNVAPASWQYGQTYESSTNF 120
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 16988918 16989280 - Bma011714.1 Bma14g01167 95148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01167 120 PANTHER EXPANSIN-A15 1 120 IPR002963 GO:0009664
Bma14g01167 120 Gene3D - 26 120 IPR036749 -
Bma14g01167 120 PRINTS Expansin signature 102 118 IPR002963 GO:0009664
Bma14g01167 120 PRINTS Expansin signature 38 59 IPR002963 GO:0009664
Bma14g01167 120 PRINTS Expansin signature 26 38 IPR002963 GO:0009664
Bma14g01167 120 PRINTS Expansin signature 2 15 IPR002963 GO:0009664
Bma14g01167 120 PRINTS Expansin signature 73 94 IPR002963 GO:0009664
Bma14g01167 120 PANTHER EXPANSIN 1 120 - -
Bma14g01167 120 PRINTS Expansin/Lol pI family signature 64 78 IPR007118 GO:0005576
Bma14g01167 120 PRINTS Expansin/Lol pI family signature 102 116 IPR007118 GO:0005576
Bma14g01167 120 PRINTS Expansin/Lol pI family signature 10 26 IPR007118 GO:0005576
Bma14g01167 120 Pfam Expansin C-terminal domain 28 105 IPR007117 -
Bma14g01167 120 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 37 116 IPR007117 -
Bma14g01167 120 SUPERFAMILY PHL pollen allergen 24 116 IPR036749 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01167 Bma-Chr14:16988918 Bma01g01865 Bma-Chr1:68418003 4.34E-49 dispersed
Bma14g01167 Bma-Chr14:16988918 Bma14g01168 Bma-Chr14:17053252 3.64E-86 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01167 - - nnu:104603095 174.481