Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01189 ATGGGGTCCTGCCTTTCTACAGAAAGCAGTAGCCCTATTCCTGGATCACCAAATTCTCCAGCAAGGAGAGCTGAGAAGAGAAAATCGTCAAAGAAACGACTAAGATCACGTGGCTCTTCGTTTGACTATCGAAGGGAAGAACCTCTGCATCGAATCCCTGGGAGGATGTTCTTGAATGGGTCTAGTGAAGTTGCTTCTTTGTTCACTCAACAGGGTAGAAAAGGAACAAACCAAGATGCCATGATTGTTTGGGAGAATTTCGGTTCGAGAAGTGACACGATCTTCTGTGGAGTGTTTGACGGGCACGGACCATTCGGCCATATGGTTGCTAAGAGAGTGAGGGATTCTCTTCCTCTGAAAGTAAAAGCCCAGTGGGAATTCAATGCAGTGACTGAAGAAGTTGTCCGAGAACTCAGTGCCGATCCTAATGGAGAAACAAACAGAGATGACGATGAAGTAGGGGCTAGAGTCTCCATTGACATTGCCGAATCGGAGAAGCCGAAAGAAATTTTTCAAACATTGAAGGAATCATTTCTAAAGGCCTCTAAAGTGATGGACAGAGAATTGAGGATGCATCCGAGTATCGATTGTTTCTGTAGCGGCACTACCGCCGTGACGTTGGTTAAGCAGGGGGAAAACCTTGTGATTGGAAATGTTGGAGATTCCAGAGCTGTAATGGCTACAAGAGATAAAGATGACACCCTTGTTGCCATTCAGTTGACCGTCGATCTGAAGCCGAATCTTCCTGGAGAAGAAGAGAGAATTCGCAGCTGTAGAGGCCGGGTCTTTGCTCTTGAAGATGAACCGGAGGTTGCCAGAGTATGGCTTCCGAACAGCGACTCCCCTGGCCTTGCTATGGCTCGTGCATTTGGAGATTTTTGTCTCAAGGATTTTGGTCTTATATCTGTACCCGAAATAACCTGCCGACAACTAACCGAAAAGGATGAATTTGTCGTCATGGCGACGGATGGGATATGGGACGTTTTATCAAATTCAGAGGTAGTGGATATTGTAGCATCGGCCCAGTCTCGGTCGACCGCAGCTCGAGCTCTTGTAGAGGCAGCTGTTCGAGAATGGCAGTGTAAATTTCCTACTTCCAAAGTCGATGATTGTGCTGTTGTGTGCCTATTCGTTGATTCGAACGCAAACAACTTATCAATGGCCTCGAATGCCAAATCCAAAGATTGTCTTTCCTCCGAGGCTCGAATTTGCAATGGCGATGCTGCCATTAACGAGGACCTCTCTACGCCTGGCGATCTGAATCGCTCAGGCACAGTACGAACGGTCAAAGACATTCTGGGTGAAGAGGAAGAAGAAGACTGCGAGAATATGGCCGGGACTAGAAGTAAGTGGTCGGCCCTAGAAGGCGTGTCGAGAGTAAACTCGTTATTGACTTTGCCGAGATTTGTTTCGACGAAGAAGGAGAAGGCCCGATGA 1437 47.39 MGSCLSTESSSPIPGSPNSPARRAEKRKSSKKRLRSRGSSFDYRREEPLHRIPGRMFLNGSSEVASLFTQQGRKGTNQDAMIVWENFGSRSDTIFCGVFDGHGPFGHMVAKRVRDSLPLKVKAQWEFNAVTEEVVRELSADPNGETNRDDDEVGARVSIDIAESEKPKEIFQTLKESFLKASKVMDRELRMHPSIDCFCSGTTAVTLVKQGENLVIGNVGDSRAVMATRDKDDTLVAIQLTVDLKPNLPGEEERIRSCRGRVFALEDEPEVARVWLPNSDSPGLAMARAFGDFCLKDFGLISVPEITCRQLTEKDEFVVMATDGIWDVLSNSEVVDIVASAQSRSTAARALVEAAVREWQCKFPTSKVDDCAVVCLFVDSNANNLSMASNAKSKDCLSSEARICNGDAAINEDLSTPGDLNRSGTVRTVKDILGEEEEEDCENMAGTRSKWSALEGVSRVNSLLTLPRFVSTKKEKAR 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 17654222 17656610 + Bma011749.1 Bma14g01189 95170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01189 478 Gene3D - 60 379 IPR036457 -
Bma14g01189 478 ProSiteProfiles PPM-type phosphatase domain profile. 64 378 IPR001932 -
Bma14g01189 478 CDD PP2Cc 64 378 IPR001932 -
Bma14g01189 478 SUPERFAMILY PP2C-like 61 379 IPR036457 -
Bma14g01189 478 SMART PP2C_4 53 376 IPR001932 -
Bma14g01189 478 PANTHER ALPHABET, ISOFORM E-RELATED 1 463 - -
Bma14g01189 478 MobiDBLite consensus disorder prediction 1 17 - -
Bma14g01189 478 Pfam Protein phosphatase 2C 70 357 IPR001932 -
Bma14g01189 478 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 463 - -
Bma14g01189 478 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01170 Bma-Chr14:17105289 Bma14g01189 Bma-Chr14:17654222 0 dispersed
Bma14g01189 Bma-Chr14:17654222 Bma14g01198 Bma-Chr14:17788476 6.26E-07 proximal
Bma13g00370 Bma-Chr13:6866969 Bma14g01189 Bma-Chr14:17654222 0 wgd
Bma13g00328 Bma-Chr13:5872581 Bma14g01189 Bma-Chr14:17654222 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01189 - - pvy:116141626 647.891