Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01196 CTTTCGCTTCTTCTTCTACTTCATGAAAACTCTAAGCCATTAAAGTTTATATTTTTATCCACAAAGCTTTCATTCATGGCTTCCATGAACTGGCTTGGTTTCTCTCTTTCTCCCCAGGAGTTTTCTTCTCAAGCATGTGAAGATCATTCTGCCCAAAGCTCGGTTTCCCGCCTCGGATTCGACTCCGATGAAATATCCGGCCATGTCTCCGGCGACTGCTTCGATCACTCTTCTACTCCCTCTCTTATTCTCCCTCCTCCTTTTGGACTTCTTGAATCTTACAACCATCGCCCCAATCAATCTCAAGATTGGAACTTTAAGAGTACGGCGATGAACTCTGACAACAACTACAAAGAAAACTCGTCAGAACTTTCAATTTTAATGGCTACCACTTCATGCAGCAGCCGAAACATCGAAACCCATCATCAACCGAAGCTCGAAAACTTTCTCGGCCGCGAAAACCCAAACTCCTTCATATACGCAGCAAATGCGGCGATCGGAGATGGAGGTGACGGTGGAGCTAATGGCAGTAGTGTTAATAGTAGCTCTATTGGTAGTGTTAATAGTAGCTCTATTGGGTTGTCAATGATAAAGACATGGCTAAGAAGCCAACCAACACATTCCATTGCAGAGAATAAGAACGATGATGGCGGATCAAAAACCAGAAATGCACAAAGTTTGTCACTTTCTATGAGCACTGGTTCTAGTTCGCCATTGCTCCAAACTAGCTCTGCCGGAAATGGTGGTGGGGAGAGTTCTTCGTCAGAGAATAAGCAAATTAAGATTTCATCCAGTATGGATGCCAAAAATGGCGCCATTGAAGGTGTGCCAAGAAAGTCCATGGATACATTTGGACAAAGAACTTCTATTTATCGTGGCGTAACAAGGCATAGATGGACGGGTAGATACGAGGCTCATCTGTGGGACAACAGTTGCAGAAGAGAAGGACAAACTAGGAAAGGAAGACAAGGAGGTTATGATAAAGAAGATAAAGCAGCAAGAGCCTATGATTTAGCAGCACTTAAATATTGGGGTACCACTACTACTACAAATTTCCCAATTAGCAGCTACGAAAAAGAAATAGAAGAAATGAAGCACATGACGAGACAAGAATACGTGGCATCTCTTAGAAGGAAGAGTAGTGGGTTTTCTCGAGGAGCTTCGATTTATCGTGGAGTAACGAGACACCATCAACATGGAAGATGGCAAGCAAGGATTGGAAGAGTTGCAGGAAACAAAGACCTATATTTAGGAACTTTCAGCACTCAAGAGGAAGCTGCAGAGGCTTACGACATTGCAGCCATAAAGTTCAGGGGGCTAAATGCTGTGACAAACTTTGATATGAACAGATATGATGTAAAATCAATCTTAGAAAGCAGTACTCTCCCCATTGGAGGAGCCTCAAAGAGATTGAAAGATGTTGATCAAGCTGAGATCATGTCCGTCGACGGACTAAGAACCGACGAAGAATCCATTTCCCAACTCACCGACCAAGGAATGGGGGGCTACGGCAGCTTGAACCACCATCCCTGGCTGGGTTTTTCCTTCCAACAAGCTCGGTTTCAGCCCTACAATGGCTTCCACCACCCCTATGGTCAAAGGGGTTGGTGTAAGCAAGAGCAAGACTCCGAGGTGGTCTCCCATGGCTTCCATGATCTTCACCAGCTTCAAACTGGAAACACCCACAATTTCTTTCAGAATAATTCTTCTCTGCATAATCTGACAGCGATGGATTCTTCCTCGATGGAGCATAGTTCTGGTTCTAACTCCATTATTTACAGCAATGGAGGCGGAGGAAATAACAACAGTAATGGCGGAGTTATCGGATATGGAAGCTGCAACAATGGCGGCGGATATGGGATTCCGGTCGGAACAACGATAATTTCAAATGATCATGAAAATGGCGGTGGAGGGTACGAGAATCTTTTTGGAAATTCAGTGGATCCTTATCAGGGAAGGAACTTGTATTGTCTATCGCAACAATCACCAGTATCAACGGCTGTGAATAAACCTAGCGCATATGATCAAGGGTCAGCGTGCAACAACTGGGTCCCAACTGCAGTTCCAACCCTAGCTCCGAGGTCTCCTAACATGGCTGTCTGTCATGGAACTCCAGCTTTCACCATTTGGAATGACTCCTAG 2142 44.72 LSLLLLLHENSKPLKFIFLSTKLSFMASMNWLGFSLSPQEFSSQACEDHSAQSSVSRLGFDSDEISGHVSGDCFDHSSTPSLILPPPFGLLESYNHRPNQSQDWNFKSTAMNSDNNYKENSSELSILMATTSCSSRNIETHHQPKLENFLGRENPNSFIYAANAAIGDGGDGGANGSSVNSSSIGSVNSSSIGLSMIKTWLRSQPTHSIAENKNDDGGSKTRNAQSLSLSMSTGSSSPLLQTSSAGNGGGESSSSENKQIKISSSMDAKNGAIEGVPRKSMDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEDKAARAYDLAALKYWGTTTTTNFPISSYEKEIEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESSTLPIGGASKRLKDVDQAEIMSVDGLRTDEESISQLTDQGMGGYGSLNHHPWLGFSFQQARFQPYNGFHHPYGQRGWCKQEQDSEVVSHGFHDLHQLQTGNTHNFFQNNSSLHNLTAMDSSSMEHSSGSNSIIYSNGGGGNNNSNGGVIGYGSCNNGGGYGIPVGTTIISNDHENGGGGYENLFGNSVDPYQGRNLYCLSQQSPVSTAVNKPSAYDQGSACNNWVPTAVPTLAPRSPNMAVCHGTPAFTIWNDS 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 17721162 17727141 + Bma011755.1 Bma14g01196 95177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01196 713 ProSiteProfiles AP2/ERF domain profile. 389 447 IPR001471 GO:0003700|GO:0006355
Bma14g01196 713 MobiDBLite consensus disorder prediction 219 266 - -
Bma14g01196 713 Pfam AP2 domain 290 345 IPR001471 GO:0003700|GO:0006355
Bma14g01196 713 Pfam AP2 domain 389 439 IPR001471 GO:0003700|GO:0006355
Bma14g01196 713 PANTHER BNAC02G44180D PROTEIN 29 711 - -
Bma14g01196 713 SUPERFAMILY DNA-binding domain 388 448 IPR016177 GO:0003677
Bma14g01196 713 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 29 711 - -
Bma14g01196 713 Gene3D AP2/ERF domain 290 355 IPR036955 GO:0003700|GO:0006355
Bma14g01196 713 Gene3D AP2/ERF domain 389 449 IPR036955 GO:0003700|GO:0006355
Bma14g01196 713 CDD AP2 289 355 IPR001471 GO:0003700|GO:0006355
Bma14g01196 713 ProSiteProfiles AP2/ERF domain profile. 290 353 IPR001471 GO:0003700|GO:0006355
Bma14g01196 713 SMART rav1_2 290 359 IPR001471 GO:0003700|GO:0006355
Bma14g01196 713 SMART rav1_2 389 453 IPR001471 GO:0003700|GO:0006355
Bma14g01196 713 MobiDBLite consensus disorder prediction 208 279 - -
Bma14g01196 713 SUPERFAMILY DNA-binding domain 289 355 IPR016177 GO:0003677
Bma14g01196 713 CDD AP2 388 447 IPR001471 GO:0003700|GO:0006355
Bma14g01196 713 PRINTS Ethylene responsive element binding protein signature 291 302 IPR001471 GO:0003700|GO:0006355
Bma14g01196 713 PRINTS Ethylene responsive element binding protein signature 429 449 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01163 Bma-Chr14:16921957 Bma14g01196 Bma-Chr14:17721162 0 dispersed
Bma14g01196 Bma-Chr14:17721162 Bma15g00429 Bma-Chr15:4647271 2.12E-06 dispersed
Bma14g01196 Bma-Chr14:17721162 Bma07g01409 Bma-Chr7:49858960 7.05E-126 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58366 PF00847 AP2 2.40E-08 CL0081 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01196 K09285 - qsu:111984882 819.69