Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01215 ATGAATGATGCAATAACATCAGATGACAATTCCAAAAGGACTGATTGGCCTACCTGGGGGGATCCGTTTATTTCTGTTGATGATGGTGTGGAACCAAATTGGAGTGATCTGTTTTCTGATGTTAATGTGCCAGCTCCTGAAGTAAAGGTGGTGAAGTCGTCTTCTGAAACTATTGCTCCACTGCCCCAGACCATTATTCTTGATCATTTACCACCTTCCTCCAACTCATTATCTTCTGCGGCCTCCACAAGACCAAGAATGCGGTGGACACCGGAGCTTCATGAGGCTTTTGTGGAGGCAGTCAATCAGCTTGGTGGCAGTGAAAAGGCCACTCCGAAAGGTGTTCTAAGGCTGATGAATGTTGAAGGCTTAACAATTTATCATGTCAAAAGCCACCTGCAGAAATATCGAACTGCCAGGTTTAAACCAGAGTCGTCTGATGGTATTGCTAATCAATTTCTTTTTACTTCTGACTATGCATCTGACTTAAAATATAGGAGCATGGGAATAACTGAAGCATTGCGCCTGCAAATGGAAGTTCAGAAGCAGCTTCATGAACAACTTGAGATTCAAAGAAATTTGCAGTTAAGAATTGAAGAACAGGGAAGACGTCTTCAAGAGATGTTTGAGAAACAAAGAAATATGGACAACACCAAGACGAAGGCATCTTCATCTACCTTAGATAGACCCTCTTCTCCACAACCAAATGCAGTGCAATCTTCCTCTGCAGATGCCCAATCGAAGACCTCTGACAAAATTCAATCAGCCGCCGAAAATCCAGGGTCTGTAAATGGGAAGAAAAAAGCAGAGGAAACTGAAAAGAGCAAGAATGCCGAGGAAGATGAAGGCGAGCCTCGAAAACGGGCAAGAACAGGAGATGAATAA 885 43.28 MNDAITSDDNSKRTDWPTWGDPFISVDDGVEPNWSDLFSDVNVPAPEVKVVKSSSETIAPLPQTIILDHLPPSSNSLSSAASTRPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLRLMNVEGLTIYHVKSHLQKYRTARFKPESSDGIANQFLFTSDYASDLKYRSMGITEALRLQMEVQKQLHEQLEIQRNLQLRIEEQGRRLQEMFEKQRNMDNTKTKASSSTLDRPSSPQPNAVQSSSADAQSKTSDKIQSAAENPGSVNGKKKAEETEKSKNAEEDEGEPRKRARTGDE 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 18590862 18593129 - Bma011786.1 Bma14g01215 95196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01215 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 141 IPR017930 -
Bma14g01215 294 Pfam Myb-like DNA-binding domain 86 137 IPR001005 -
Bma14g01215 294 MobiDBLite consensus disorder prediction 210 294 - -
Bma14g01215 294 MobiDBLite consensus disorder prediction 264 294 - -
Bma14g01215 294 SUPERFAMILY Homeodomain-like 82 138 IPR009057 -
Bma14g01215 294 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 85 138 IPR006447 GO:0003677
Bma14g01215 294 PANTHER PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 59 291 - -
Bma14g01215 294 Pfam MYB-CC type transfactor, LHEQLE motif 168 214 IPR025756 -
Bma14g01215 294 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 59 291 IPR044848 GO:0003700
Bma14g01215 294 Coils Coil 171 191 - -
Bma14g01215 294 MobiDBLite consensus disorder prediction 218 261 - -
Bma14g01215 294 Gene3D - 83 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01503 Bma-Chr4:51061360 Bma14g01215 Bma-Chr14:18590862 8.41E-44 dispersed
Bma14g01215 Bma-Chr14:18590862 Bma02g01204 Bma-Chr2:54120400 2.74E-45 dispersed
Bma13g00423 Bma-Chr13:7767665 Bma14g01215 Bma-Chr14:18590862 4.46E-131 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58367 PF00249 Myb_DNA-binding 3.50E-09 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01215 - - vvi:100240786 300.056