Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01220 ATGGCCTCTCTTTCCTGCTCCGCCGTTGATTTGGTCCCTCTGCTCGGTGCCACGAGCTCCAACTCCACAGCCATGGCAGAGTTCTTCTGTACAAGATTCAACGCCATAGCCAACAAGCTTTCCGACACTACTTATGCAGTGGATAATACTTATCTCTTATTCTCTGCATATCTGGTTTTCGCTATGCAGCTTGGATTCGCCATGCTTTGCGCTGGATCTGTTCGAGCGAAGAACACGATGAACATTATGCTCACCAACGTCCTCGACGCCGCAGCCGGAGGCCTCTCGTACTACCTCTTTGGTTACGCTTTCGCCTTTGGATCGCCTTCTAATGGCTTCATCGGCCGTCATTTTTTCGGTCTCAGTGATTTTCCGTCGGTTTTGGGAGATTACAGTTTATTTCTCTTCCAGTGGGCTTTCGCAATCGCCGCAGCAGGAATTACCAGCGGTTCGATCGCCGAGAGAACGCAGTTTGTTGCTTATCTTATATACTCCTCTTTCTTGACTGGTTTCGTCTACCCGGTTGTATCTCATTGGTTCTGGTCAGCTGACGGGTGGGCTAGCCCGATCCGAAGTGACAAAAACTTACTGTTCGGGTCCGGGGCGATTGACTTCGCCGGATCAGGGGTTGTTCACATGGTGGGCGGGATAGCCGGGTTGTGGGGCGCATTGATCGAAGGCCCGCGAATAGGCCGGTTCGACCGATCCGGACGATCCGTGGCGTTGCGTGGACACAGCGCGTCCCTAGTTGTTCTTGGATCATTTTTACTTTGGTTCGGTTGGTACGGGTTTAACCCGGGATCGTTTCTGACGATCTTGAAAGGGTACGGCGACGGAGGTAACTACTACGGACAGTGGAGTGCCGTCGGCCGAACAGCAGTCACGACCACACTGGCTGGTTGCACGGCAGCACTCACAACGCTATTCGGCAAGCGCTTAATCGCCGGCCACTGGAACGTCACCGACGTGTGCAACGGACTACTCGGGGGTTTCGCCGCCATCACCTCCGGCTGCTCAGTGGTTGAACCCTGGGCGGCAATACTCTGCGGATTCATCGCCGCCTGGGTTTTAATCGGGTTCAACATGCTGGCAGAGAAGTTCAACTACGACGATCCTCTCGAAGCGGCGCAACTCCACGGCGGATGCGGGTCGTGGGGGTTGATATTCACCGGGCTCTTTGCCCAGGAGGCTTACGTCAATGAGGTCTACTCGAACAAGTTGGGGAGACCGTACGGGCTATTCATGGGCGGCGGAGGGAAACTACTGGCGGCCCAAATCATCCAGATCTTGGTGATCGCCGGGTGGGTCTCGGCCACGATGGCCCCGCTATTTTATGCAATGCATAAACTGAAGATATTGAGGATATCGCGAGATGATGAGATGGCAGGTATGGATCTGACTAGGCATGGAGGCTTTGCTTACGTGTACCACGATCAGGATGACGGGTCAGGGAGTAGGCCCGGGTTTATGATGAGCAAGGTGGATCCCAATTCAGGAAGTCCGGTTGGCGATCAGAAACTTTCTCCCAGGGCCGTCTGA 1539 54.45 MASLSCSAVDLVPLLGATSSNSTAMAEFFCTRFNAIANKLSDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGYAFAFGSPSNGFIGRHFFGLSDFPSVLGDYSLFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPIRSDKNLLFGSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTILKGYGDGGNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRLIAGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAILCGFIAAWVLIGFNMLAEKFNYDDPLEAAQLHGGCGSWGLIFTGLFAQEAYVNEVYSNKLGRPYGLFMGGGGKLLAAQIIQILVIAGWVSATMAPLFYAMHKLKILRISRDDEMAGMDLTRHGGFAYVYHDQDDGSGSRPGFMMSKVDPNSGSPVGDQKLSPRAV 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 18758158 18759696 - Bma011791.1 Bma14g01220 95201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01220 512 ProSitePatterns Ammonium transporters signature. 204 229 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bma14g01220 512 TIGRFAM amt: ammonium transporter 48 474 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bma14g01220 512 MobiDBLite consensus disorder prediction 486 512 - -
Bma14g01220 512 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Bma14g01220 512 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Bma14g01220 512 SUPERFAMILY Ammonium transporter 45 455 - -
Bma14g01220 512 Pfam Ammonium Transporter Family 51 474 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bma14g01220 512 Gene3D Ammonium transporter AmtB like domains 27 487 IPR029020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00744 Bma-Chr2:38467196 Bma14g01220 Bma-Chr14:18758158 0 dispersed
Bma02g00930 Bma-Chr2:49092498 Bma14g01220 Bma-Chr14:18758158 7.98E-25 dispersed
Bma13g00745 Bma-Chr13:23403753 Bma14g01220 Bma-Chr14:18758158 0 dispersed
Bma14g01220 Bma-Chr14:18758158 Bma15g00616 Bma-Chr15:7829645 2.26E-22 dispersed
Bma14g01220 Bma-Chr14:18758158 Bma10g00389 Bma-Chr10:3828980 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01220 K03320 K07573 zju:107412282 840.106