Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01233 ACAGCAATGGATTCCTCCGTCTTCTTCTTCTCTGATTCTTCTTCTTTTTCCTCTTCAATGGAGTCTTTCTCGTGGAAATCTGGCCTTCATTTGGAGAACAATCTCTTACCTTTCAATCAGAACGATTCCGAAGAAATGCTTCTTTACGGAGTTCTTACTGAGCCCGTCACCGATCGTTCTTCCGATTCTAATTTCTCGAACGATCAGGACGAGGTGGATTCGGAATCAACGAAAGAGTCGGAGGTTTGTTACAGAGGAGTGAGGAGAAGGCCGTGGGGAAAATTCGCTGCGGAGATCAGAGATTCCACGAGGAATGGAGTTAGGGTTTGGTTGGGGACTTTCGACACGGCGGAGGCGGCGGCGCTGGCGTACGATCAAGCGGCGTTCGCGATGCGAGGCTCAAGCACGGTGCTTAATTTCCCGGCGCAAATGGTGGAGCAATCGCTGCGCGAGATGAATTACGGAGCGGAGGAGGGGAGTTCCCCTGTTCTGGCTCTGAAGAAGAGGCATTCGATGAAGAAAAAACCTAAACATTCGAAGACGAAGAAGAAGGAGAACGATTCGGTTTCGGAAAACGTGGTGGTGTTTGAAGATTTGGGGGCTGAGTACTTGGAAGAACTTTTGGGATTGTACGAAGCTTCTTCCAATCCATGGTGA 657 49.47 TAMDSSVFFFSDSSSFSSSMESFSWKSGLHLENNLLPFNQNDSEEMLLYGVLTEPVTDRSSDSNFSNDQDEVDSESTKESEVCYRGVRRRPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAAFAMRGSSTVLNFPAQMVEQSLREMNYGAEEGSSPVLALKKRHSMKKKPKHSKTKKKENDSVSENVVVFEDLGAEYLEELLGLYEASSNPW 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 19694001 19694657 + Bma011814.1 Bma14g01233 95214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01233 218 MobiDBLite consensus disorder prediction 160 188 - -
Bma14g01233 218 Pfam AP2 domain 83 133 IPR001471 GO:0003700|GO:0006355
Bma14g01233 218 ProSiteProfiles AP2/ERF domain profile. 83 141 IPR001471 GO:0003700|GO:0006355
Bma14g01233 218 Gene3D AP2/ERF domain 83 143 IPR036955 GO:0003700|GO:0006355
Bma14g01233 218 MobiDBLite consensus disorder prediction 167 181 - -
Bma14g01233 218 SMART rav1_2 83 147 IPR001471 GO:0003700|GO:0006355
Bma14g01233 218 CDD AP2 84 143 IPR001471 GO:0003700|GO:0006355
Bma14g01233 218 SUPERFAMILY DNA-binding domain 83 142 IPR016177 GO:0003677
Bma14g01233 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 29 210 - -
Bma14g01233 218 MobiDBLite consensus disorder prediction 57 78 - -
Bma14g01233 218 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
Bma14g01233 218 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
Bma14g01233 218 PANTHER DNA-BINDING DOMAIN 29 210 IPR044808 GO:0003700|GO:0009873
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma13g00432 Bma14g01233 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01068 Bma-Chr5:49419731 Bma14g01233 Bma-Chr14:19694001 1.19E-46 dispersed
Bma10g00419 Bma-Chr10:4382388 Bma14g01233 Bma-Chr14:19694001 1.87E-25 dispersed
Bma13g00712 Bma-Chr13:20969091 Bma14g01233 Bma-Chr14:19694001 2.83E-55 dispersed
Bma14g01233 Bma-Chr14:19694001 Bma15g00639 Bma-Chr15:9146437 3.55E-48 dispersed
Bma14g01225 Bma-Chr14:19046272 Bma14g01233 Bma-Chr14:19694001 9.26E-59 proximal
Bma13g00432 Bma-Chr13:8000882 Bma14g01233 Bma-Chr14:19694001 1.52E-87 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58370 PF00847 AP2 1.10E-15 CL0081 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01233 K14516 - qsu:112003251 202.986