Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01254 ATGGATAGGAACACACATGAGGGGATTGGGGATGATTTCTTCGAGCAGATTTTAGCTGTGCCTCCGGTTTTTAATGGCGGAGACTCGGCCGAGTACTGCGGAAGTGAGGCGAGCTCTGTGGCTATGGCGTTACAGTTAGGGTCTGGAGTGGGAGGAGGAAGAGACGATTGCGGTGACTCTGGTGGTGGATTGAGAGGGATCGCCATGCAAGGCTTGGGTATGCCTCTTGGATTGAACTTGGAACAGAGCTTTTTGAGGCGAGAGAGATTTGGAGAAGAGATTGAAGCTAATAGTCGTAACAATGCGAATAATAATGCTTCTTCTTCTGCTACTTCTGGAATTTCTGAAAGAGATTCTGTGCATATGAACGCTTTATTAGCAACTTTTGGACATGTACAGTGTCGGTCTTTTCGACCTGAGCAACCTCCTTCCCAACTCCACCAGCCCTTTCATTGTCAACCAATCTGTGGGAAAATTCCTGCTGTGTCCCAGCCACCCACGATCCGACCTCGTGTTCGAGCAAGGAGAGGCCAAGCAACAGATCCTCACAGCATTGCAGAGAGGTTGCGAAGGGAAAGAATTGCAGAAAGAATGAAGGCTTTGCAGGAGTTGGTTCCTTGTTGTAACAAGTCAGATAGGGCAGCTATGCTTGACGAAATTGTGGATTATGTAAAGTTTCTAAGGCTTCAAGTCAAGGTTCTGAGCATGAGCAGATTAGGTGGAGCGGGTGCAGTGGCTCAGCTCATTTCGGATGTGCCTGGAACGGGTGTAGTCGAGGGAATTGAAGGTGGAACTAATCAACAAGCTTGGGAAAAATGGTCAACTGATGGAACAGAGCAACAAGTAGCCAAATTGATGGAAGAAGACATCGGAGCTGCAATGCAATTGCTTCAATCCAAGGCTCTATGCATCATGCCCATATCATTAGCTTCAGCAATTTTCCGAACCCACCAACCGGACACTCAGATGACAATTAAGCCAGAATCCGACGCCCCATAA 999 47.75 MDRNTHEGIGDDFFEQILAVPPVFNGGDSAEYCGSEASSVAMALQLGSGVGGGRDDCGDSGGGLRGIAMQGLGMPLGLNLEQSFLRRERFGEEIEANSRNNANNNASSSATSGISERDSVHMNALLATFGHVQCRSFRPEQPPSQLHQPFHCQPICGKIPAVSQPPTIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPCCNKSDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLISDVPGTGVVEGIEGGTNQQAWEKWSTDGTEQQVAKLMEEDIGAAMQLLQSKALCIMPISLASAIFRTHQPDTQMTIKPESDAP 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 20440056 20444554 + Bma011843.1 Bma14g01254 95235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01254 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 237 IPR036638 GO:0046983
Bma14g01254 332 PANTHER DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED 7 321 - -
Bma14g01254 332 MobiDBLite consensus disorder prediction 95 115 - -
Bma14g01254 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
Bma14g01254 332 Pfam Helix-loop-helix DNA-binding domain 183 227 IPR011598 GO:0046983
Bma14g01254 332 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 321 - -
Bma14g01254 332 MobiDBLite consensus disorder prediction 96 115 - -
Bma14g01254 332 Gene3D - 173 235 IPR036638 GO:0046983
Bma14g01254 332 SMART finulus 184 233 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01254 Bma-Chr14:20440056 Bma15g00648 Bma-Chr15:9352134 3.82E-22 dispersed
Bma01g00324 Bma-Chr1:2675360 Bma14g01254 Bma-Chr14:20440056 1.94E-55 transposed
Bma09g00346 Bma-Chr9:30183026 Bma14g01254 Bma-Chr14:20440056 3.82E-86 transposed
Bma09g00617 Bma-Chr9:43393282 Bma14g01254 Bma-Chr14:20440056 6.91E-88 transposed
Bma15g00611 Bma-Chr15:7800367 Bma14g01254 Bma-Chr14:20440056 5.84E-98 transposed
Bma13g00455 Bma-Chr13:8578593 Bma14g01254 Bma-Chr14:20440056 0 wgd
Bma13g00449 Bma-Chr13:8475439 Bma14g01254 Bma-Chr14:20440056 1.86E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58372 PF00010 HLH 4.60E-07 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01254 - - zju:107412218 400.208