Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01282 ATGGGTGCACCAAAGAAAGTTGGGTCGAGGACTTCTGACGACTCTGACGAGTTGGCTCGTGTTTCCTTGCAGGCCATCCTTCTAGCTGATAGCTTTGCCACCAAGTTTCAGCCCATAACTCTCGAACGGCCTAAGGTATTACTTCCGCTTGTGAATGTCCCAATGATAAATTATAGCTTAGCATGGCTTGAATCTGCAGGCGTTGAAGAAGTTTTTGTATTTTGCTGTGCTCATTCAAGGCAAGTAATTGATTATTTGGAGAATTCTGAATGGTTCTCTCAACCAGAGTTCTCGGTCACAACAATAGAATCACACAATTCTGTGAGTGCGGGAGACGCTCTGCGCTTAATCTATGAAAAGAATGTGATACATGGAGACTTTATCCTTATCACAGGAGATACAATAAGCAACATGTCACTTTCACAAGCTCTTCAGGAACACAAGGAAAGAAAGAAAAGAGATAGCAATGCAGTAATGACCATGATTATCAAACAATCGATGCCCTCTCCTATCACTCACCAATCTCGTCTTGGTACTGATGAGCTGTTTATGGCAGTAGATCCTGACACTAAGCAACTACTATATTATGAGGATAGAGCGGACCAATCAAAAGGGGCTATATATCTTGATAAGCTATTACTGATGGATAATCCTTTAATTTCTCTTCACAATGACAAACAGGATTGCTATATAGATATTTGTTCTCCAGAAGTCCTCAGTCTTTTCACAGATAACTTTGACTATCAGCATCTTCGACGCCACTTTGTCAAAGGATTGCTCGTCGATGATATCATGGGTTACAAGATCTTTACACATGATATTCACTCGAGCTATGCAGCTAGGATTGATAATTTTCGAAGCTATGATGCAATTAGCAAGGACATTATACAGAGGTGGTCATATCCATTCGTTCCAGATGTTAAATTCTTTGGAAATTCCACGACAAAACTTGAAAGACAGGGGATGTATAGAGCTTCAGATATTACGCAAGCTCGTTCTGCTCAAATAGGTTCTTCTACTGTTATCGGAAAGAACACTGAAATCAGGTGCAACACCAAAATTTCAAATTCAGTTGTTGGACAAGGATGCAAAATTGGATCCAACGTTTTGATAGAAGGTTCTTACATATGGGATAATGTTACTATCGAGGACGGCTGTAAATTAAGGCATGCAATTGTTTGCGATGGAGTGACCCTGAGATTGGGAGCTGAACTAGAACCTGGTGTAGTTTTGTCTTTCAATGTTGTTATAGGTCAACAATTTGTTGTTCCTGCATATTCAAAGGTGTCATTGTTTCAGCAACCAACCAAGCTAGATAGCGATGAGGAGCTGGAATATGCTGATAATAGCAGTGTTATTATTGAAAGTAATGATTATTACTATCTATTTTCCTTTTGGAATTTGCATGACTCTTTTGAAATTAATTTAATGCATCATTCTTATAAAAATGTTGAAGCAACTTTCTTAAGAGCCGTGCACGAAAATATTAAAGTAGACAACGTAATTTTGGAAGTGAACTCGTTACGGTATGTTAAATGGATTCACTTTTGGTTAAATATCTTAGAAGTGATCATCGGAAGAGGTAATATGTCTACTTGTCTTCTTGGCAGATTATCATATAACAAAGAAGCTGCGGATTGTGCTGGGGCAATATTTTTTTCATTAATAAAATATTCCCTAGAAACTCCACATAGTTCTGCTAGTGAATTGTTGCAAAATGCTACAAGTACAATTACAAAATGGAAAAAACTTCTCAAGTCTTACCTTGCTGACTTGGATGAGGAGATGGAAGTAATTTTGAAATTTGAAGAGATGTGTGTGGAATCTGCCAAGGAATTTAATCCATACTTCGCGAAGATATTGTGTCATTTGTACGACCAAGAAATAATTCAAGAGGAGGCCATTTTAAGGTGGGAAGACGAGAAGAAGGACGCAGAGGAATCAGATAAAATTTTCGTCAAGCAATCTGAGAAATTTATACAAGTAAAGTTTCCATCGCTCTCTTTCAAAACACCAATATATTTCAATTGCTAA 2034 37.91 MGAPKKVGSRTSDDSDELARVSLQAILLADSFATKFQPITLERPKVLLPLVNVPMINYSLAWLESAGVEEVFVFCCAHSRQVIDYLENSEWFSQPEFSVTTIESHNSVSAGDALRLIYEKNVIHGDFILITGDTISNMSLSQALQEHKERKKRDSNAVMTMIIKQSMPSPITHQSRLGTDELFMAVDPDTKQLLYYEDRADQSKGAIYLDKLLLMDNPLISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHDIHSSYAARIDNFRSYDAISKDIIQRWSYPFVPDVKFFGNSTTKLERQGMYRASDITQARSAQIGSSTVIGKNTEIRCNTKISNSVVGQGCKIGSNVLIEGSYIWDNVTIEDGCKLRHAIVCDGVTLRLGAELEPGVVLSFNVVIGQQFVVPAYSKVSLFQQPTKLDSDEELEYADNSSVIIESNDYYYLFSFWNLHDSFEINLMHHSYKNVEATFLRAVHENIKVDNVILEVNSLRYVKWIHFWLNILEVIIGRGNMSTCLLGRLSYNKEAADCAGAIFFSLIKYSLETPHSSASELLQNATSTITKWKKLLKSYLADLDEEMEVILKFEEMCVESAKEFNPYFAKILCHLYDQEIIQEEAILRWEDEKKDAEESDKIFVKQSEKFIQVKFPSLSFKTPIYFNC 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22698737 22706455 + Bma011886.3 Bma14g01282 95263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01282 677 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Bma14g01282 677 CDD W2_eIF2B_epsilon 481 661 IPR044123 GO:0005085|GO:0031369
Bma14g01282 677 ProSiteProfiles W2 domain profile. 474 673 IPR003307 GO:0005515
Bma14g01282 677 Pfam eIF4-gamma/eIF5/eIF2-epsilon 594 661 IPR003307 GO:0005515
Bma14g01282 677 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 537 664 - -
Bma14g01282 677 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 7 458 - -
Bma14g01282 677 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 369 IPR029044 -
Bma14g01282 677 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 10 305 IPR029044 -
Bma14g01282 677 SUPERFAMILY Trimeric LpxA-like enzymes 268 430 IPR011004 -
Bma14g01282 677 PANTHER - 537 664 - -
Bma14g01282 677 Gene3D Hexapeptide repeat proteins 312 437 - -
Bma14g01282 677 Pfam Nucleotidyl transferase 25 166 IPR005835 GO:0009058|GO:0016779
Bma14g01282 677 SMART 542_3 582 661 IPR003307 GO:0005515
Bma14g01282 677 Gene3D - 481 662 - -
Bma14g01282 677 CDD LbH_eIF2B_epsilon 341 419 - -
Bma14g01282 677 PANTHER - 7 458 - -
Bma14g01282 677 SUPERFAMILY ARM repeat 537 661 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01203 Bma-Chr7:46800894 Bma14g01282 Bma-Chr14:22698737 3.68E-10 dispersed
Bma14g00004 Bma-Chr14:19179 Bma14g01282 Bma-Chr14:22698737 0 dispersed
Bma14g01282 Bma-Chr14:22698737 Bma14g00809 Bma-Chr14:9017700 3.67E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01282 K03240 - cpap:110809631 900.968