Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma14g01286 | ATGGCGCTTGAAGCTGTGGTTTTTCAGCAAGACCCTGTTCGCTATAATGGCAGCAGAGATCTATACAACTTGTTGGTAGGACATGGTTGGAGAGAAGAAAGTTATGATCAAGGGTTTGGTGATTTTCTCGGGAGCCAAACAGAAAGTAATGTCCTTTTTGGTGATGATTGCAGCTTTTCGCCACCTTCGTCAATGGCGTCCAACTGGAACGAACTCTTACAAAACTCCAACCTTTCCTCCGAAACCGTCAATGGAAGTGGGAAACTTCTGGGAGAGATTTCGCCGGAGATTCGTCCGAGGAGAAGACGACGATCGAAAATCAGAAAGAACAAGGAGGAGATTGAGAATCAGAGAATGACCCACATTGCTGTTGAGAGGAATCGGAGAAAGTTGATGAATGAGTATCTCTCTGTGCTACGGTCTCTCATGCCTGATTCTTATGTTCAAAGGGGCGATCAAGCCTCGATAATCGGAGGAGCCATTAATTTCGTGAAGGAGCTAGAACAGAAAGTGCATTTTCTCAGCAGCCAAACAGCAACTACAAAGCTGGAAAATTACACAGAAGAAAACGACCCATCAATGCCGTTCTCCGAATTCTTCAGTTTTCCTCAGTACTCAACAACCTCGTCCCTCTCTTCCCCTCCTTCCGCCATTGGAGAACAGACCAAAACCTCCATTGCCGACATAGAAGTAAACATGGTAGAAAGCCACGCGAATATCAAAATAAGATCGAAAAGAAAGCCGAAACAGCTACTAAACATAGTGGCTGGTTTGCAGAGTTTGCATCTCACTGTTCTTCATCTGAATCTCACAACTTTGGATCAAATCATTCTGTATTCTCTAAGTGTGAAGGTGGAAGATGGTTGTAAGCTGTGTTCAGCAGATGAAATAGCTGCAGCTTTGTATGAATTGATGAGTAGAATTCAAGAGGAGGGAAATCCATCGTTTAGTTGA | 954 | 43.92 | MALEAVVFQQDPVRYNGSRDLYNLLVGHGWREESYDQGFGDFLGSQTESNVLFGDDCSFSPPSSMASNWNELLQNSNLSSETVNGSGKLLGEISPEIRPRRRRRSKIRKNKEEIENQRMTHIAVERNRRKLMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVHFLSSQTATTKLENYTEENDPSMPFSEFFSFPQYSTTSSLSSPPSAIGEQTKTSIADIEVNMVESHANIKIRSKRKPKQLLNIVAGLQSLHLTVLHLNLTTLDQIILYSLSVKVEDGCKLCSADEIAAALYELMSRIQEEGNPSFS | 317 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 23293160 | 23294306 | - | Bma011893.1 | Bma14g01286 | 95267 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma14g01286 | 317 | PANTHER | MAX DIMERIZATION, MAD | 1 | 311 | - | - | |
| Bma14g01286 | 317 | SMART | finulus | 122 | 173 | IPR011598 | GO:0046983 | |
| Bma14g01286 | 317 | MobiDBLite | consensus disorder prediction | 89 | 112 | - | - | |
| Bma14g01286 | 317 | Gene3D | - | 106 | 185 | IPR036638 | GO:0046983 | |
| Bma14g01286 | 317 | PANTHER | HELIX-LOOP-HELIX-LIKE PROTEIN | 1 | 311 | - | - | |
| Bma14g01286 | 317 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 116 | 167 | IPR011598 | GO:0046983 | |
| Bma14g01286 | 317 | Pfam | Helix-loop-helix DNA-binding domain | 117 | 168 | IPR011598 | GO:0046983 | |
| Bma14g01286 | 317 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 116 | 184 | IPR036638 | GO:0046983 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma05g00711 | Bma-Chr5:41189577 | Bma14g01286 | Bma-Chr14:23293160 | 4.03E-67 | dispersed | |
| Bma06g01356 | Bma-Chr6:50447526 | Bma14g01286 | Bma-Chr14:23293160 | 3.49E-54 | dispersed | |
| Bma10g01281 | Bma-Chr10:45397082 | Bma14g01286 | Bma-Chr14:23293160 | 1.02E-25 | dispersed | |
| Bma14g01286 | Bma-Chr14:23293160 | Bma14g00153 | Bma-Chr14:2131378 | 1.71E-14 | dispersed | |
| Bma14g01286 | Bma-Chr14:23293160 | Bma14g01995 | Bma-Chr14:43258483 | 7.39E-27 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 58375 | PF00010 | HLH | 4.60E-09 | No_clan | Bma | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma14g01286 | - | - | qsu:112010387 | 304.293 |