Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01306 ATGGGGCATTTGTCCTCCATGTTCAATGGATTGGCAAAGTCGTTTTCGGTGAGGAAGGGGATAAGTAAAGAAAATGTTGGTGCACAAGAAGCTGCAGAAGCCATGGAAAAGGATGCTAAGAAAAAGGATTTAATTTTGCGTACTTCCACCAGCGTAAACTTTGATGGATCGAGCAATTTCGCCTCTGTTTGTTCTAAGAAGGGCGAGAAAGGAGTGAATCAAGATTGTTGCATAGTTTGGGAGGAATTTGGATGCCAAGATGATATGATCTTTTGTGGCATTTTTGATGGTCATGGGCCATGGGGCCATTTTGTTGCGAAAAAAGCTAGAGAATCAATGCCATCATCTCTTCTGTGCCATTGGCAAGAAGCTCTATCTCAATCTTCCTACGAATCGGACATGGACTCAGACTTTGATAAAAACCACCAACGGTTTGAGCTATGGAAAAATTCTTACATAAAAACTTGTGCAGCTATTGATCAGCAGCTTGAGCAGCATCGGAAAATTGACTCGTATTACAGCGGAACGACAGCCTTGTCAATTGTAAGACAGGGAGAGTTAATCGTCGTAGCTAACGTCGGAGACTCTCGAGCTGTATTAGCGACGTCTTTAGATGATGGAAGCTTAGTACCAGTTCAACTTTCTGTCGATTTCAAGCCCAATTTGCCTCGGGAGGCAGAGCGGATAACTCAGTGCAATGGCCGAGTGTTCTGCTTAGACGATGAGCCAGGAGTTCACAGGGTGTGGCTGCCGTACGAGCAATCCCCCGGACTGGCGATGTCACGAGCATTTGGCGATTACTGTGTCAAAGGCTTCGGTCTTATATCGGTTCCGGAAGTGACTCAAAGAATTATAACAAATGAAGATCATTTTGTCATCCTAGCAACTGATGGGGTATGGGATGTTATTTCAAATCAAGAAGCTGTGCTGATTGTATCTTCGGCCCCGGAACGAGCAAAATCAGCCAAGCGTCTAGTGAAGGCAGCGGCTCGGGCTTGGAAACGTAAACGCCCCGGGATCGCTAAGGACGACATATCGGCAATATGTCTCTTCTTTAGCCCTTCTCCTTAG 1071 45.66 MGHLSSMFNGLAKSFSVRKGISKENVGAQEAAEAMEKDAKKKDLILRTSTSVNFDGSSNFASVCSKKGEKGVNQDCCIVWEEFGCQDDMIFCGIFDGHGPWGHFVAKKARESMPSSLLCHWQEALSQSSYESDMDSDFDKNHQRFELWKNSYIKTCAAIDQQLEQHRKIDSYYSGTTALSIVRQGELIVVANVGDSRAVLATSLDDGSLVPVQLSVDFKPNLPREAERITQCNGRVFCLDDEPGVHRVWLPYEQSPGLAMSRAFGDYCVKGFGLISVPEVTQRIITNEDHFVILATDGVWDVISNQEAVLIVSSAPERAKSAKRLVKAAARAWKRKRPGIAKDDISAICLFFSPSP 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23889374 23891588 + Bma011922.1 Bma14g01306 95287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01306 356 CDD PP2Cc 59 352 IPR001932 -
Bma14g01306 356 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 356 - -
Bma14g01306 356 SMART PP2C_4 49 350 IPR001932 -
Bma14g01306 356 Gene3D - 48 353 IPR036457 -
Bma14g01306 356 Pfam Protein phosphatase 2C 75 328 IPR001932 -
Bma14g01306 356 PANTHER ALPHABET, ISOFORM E-RELATED 1 356 - -
Bma14g01306 356 SUPERFAMILY PP2C-like 48 353 IPR036457 -
Bma14g01306 356 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00618 Bma-Chr13:14686761 Bma14g01306 Bma-Chr14:23889374 0 dispersed
Bma13g00621 Bma-Chr13:14771709 Bma14g01306 Bma-Chr14:23889374 0 dispersed
Bma14g01306 Bma-Chr14:23889374 Bma14g01170 Bma-Chr14:17105289 1.07E-110 dispersed
Bma14g01306 Bma-Chr14:23889374 Bma13g00370 Bma-Chr13:6866969 7.10E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01306 - - jre:108985402 542.732