Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01308 ATGTCTACTTTTACCAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGTTAATCAATGTCGGGCAAAAGCAAGATGCATTACAAGCTCTTCATGATCTTATCACCTCCAAAAAATATCGAGCATGGCAAAAGCCACTTGAAAAGATTATGTTCAAATATGTGGAGCTCTGTGTGGACATGCGGAGAGGAAGGTTTGCGAAGGATGGTTTAATTCAATACCGAATAGTGTGTCAACAAGTCAATGTTTCTTCCTTAGAGGAGGTGATCAAGCACTTTATGCATCTATCTTCTGAGAAAGCAGAGCAGGCTCGTAGTCAGGCACAAGCACTTGAAGAAGCTCTTGATGTTGATGACTTGGAAGCAGATAAAAGGCCAGAAGATTTGATGCTTAGTTATGTCAGTGGAGAGAAGGGAAAGGATAGGTCTGATCGTGAACTTGTGACTCCATGGTTCAAATTCTTATGGGAGACTTACAGGACAGTGCTTGAAATACTACGAAACAACTCAAAATTGGAGGCACTTTATGCTATGACAGCTCATCGAGCCTTCCAGTTCTGCAAACAGTATAAAAGAGCGACAGAGTTTCGCAGACTATGTGAAATTATCCGGAATCATCTATCAAACCTTAATAAATACAGGGACCAAAGAGATCGCCCTGACTTGTCAGCACCAGAGAGCTTGCAACTTTACCTTGACACGAGATTCGAACAGCTTAAAATTGCTACTGAACTCAAACTCTGGCAGGAAGCTTTTCGTTCGGTTGAGGATATCCATGGATTGATGTGCATTGTTAAGAAAACACCAAAGTCCTCCTTGATGGTCGTTTATTATGCTAAACTGACTGAAATATTTTGGATTTCATCTAGCCATCTTTATCATGCTTATGCATGGTTCAAGCTTTTCACTCTTCAAAAAAGCTTCAACAAAAACTTAAACCAAAAGGATCTGCAGTTGATTGCTTCATCTGTTGTTTTGGCTGCACTTTCTGTTTCACCATATGATCGCACACTTGGTGCATCACATGTGGAACTTGAGAATGAGAAAGAGCGCAACTTGCGAATGGCAAATCTTATAGGGTTCAATCTCGATTCTAAATACGACAGTAGGGAAGTGCTTTCAAGGTCAAATCTTCTATCTGAACTGGTATCTAAAGGGGTGCTGAGCTGTGCAACTCAGGAAGTAAAAGATCTTTACCATCTCTTGGAGCACGAATTTCTTCCTCTTGATCTCGCCACAAAACTGCAGCCTCTGTTGACTAAACTTTCAAAGCTTGGGGGTAAGCTTTCTTCTGCTTCATCTGTACCAGAAGTGCAATTTTCGCAATATGTCAACGCCTTGGAGAAGCTTGCTACTTTGAGGGTGCTTCAGCAGGTGTCTCAAGTTTACCAATCAATGAAAATTGAGAGTTTATCTCGGATGATCTCTTTCTTTGATTTCTCGGCTGTTGAGAAAATTGCTGTTGATGCTGTCAAACATAATTTTGTAGCTATGAAAGTGGATCACACAAGAGGCGTGGTGGTGTTTGGTAATGTGGGTTTTGAATCCGATGGAATTAGAGATCACTTGTCTACTTTTGCTGAACATTTAAATAAAGCAAGGGCCATGATATATCCACCTATAACGAAAGCATCAAAAACAGAACAAATGTTGGCTAGTTTGGCAGACGTTGTGGAGAAGGAACACAAAAAACTTCTTGCTCGAAAATCTATTATTGAAAAAAGAAAAGAAGAACAGGAACGCCATCATTTAGAAATGGAGCGTGAGGAGGAGTCAAAACGGATTAAACTACAAAAGATTACTGAAGAGGCAGAGCAAAAGAGGCTTGCATCTGAGTATGAGCAAAGGAAAAACCAAAGAATACTTAGGGAAATAGAGGAACGAGAACTTGAAGAAGCTCAGGCTTTACTCCAGGAAGCTGAAAAGCGTGGTGGTAAGAAGAAGGGAAAGAAGCCAATTTTAGAAGGGGAAAAGGTGACAAAGCAAACTTTAATGGAACTAGCACTGAGTGAGCAGCTCAGGGAAAGGCAGGAAATGGAGAAGAAATTACAAAAATTGGCAAAAACAATGGATTATTTGGAGAGAGCAAAAAGAGAAGAAGCAGCACCTTTGATTGAAGCTGCATTTCAGCAACGTATAGTTGAGGAGAGAGAGCTCCATGAACGGGAGCAGCAGCTTGAGGTTGAATTGAGCAAACAACGACACGAGGGTGACCTCAAGGAGAAGATTCGACTGATTCGGATGGTGGACAATAAGAAAATATTCCAGGAGAAAGTTATGAGTCGCAGGAAAGAAGAGTTTGACAGACGAAGAGCTGAAAGGGATGAACAAATTCAGCAAATAATTCAGTTCAAGAGACAGGAAAGGGATTCTAAAAGAAAGAAAATATTTTATGTGAGACGTGAAGAAGAGAGGCTCAGAAAACTGCATGAAGAGGAGGAAGCTCAAAAGCGCGAACTGGCTGAGAAACAAAAAAGGGATGAGGCTGAAAGGAAAGCAAAATTGGACGTTATCGCTGAAAAGCAGAGGCAAAGGGAGCGAGAAATTGAGGAAAAGGAAAGAATGAGGAGAGAAGCTTTATTAGGGAAATCAAATGATGGAGCCAACAGGTCTTCTGAGACTCCTGCGTCTCTTCCTTTGGAATCTAGACCCGTAGCACCAGCTGCAGCAGCTGCAGCAGCTACAACTGCAGCCCCGGCAGCTGCTCCGGCACCTGTAAAGTATGTGCCCAGGCACATGCGTGAAAGAGCAGAGATCTCTGGAGAGGCTCCCCCTCCTCCATCAGATAGGTGGGGAAGGCAGGATGATCGTGCCTCTCAGCCGACTGACAGGTGGCGACCTGGTTCACGATCGTCTTGGTCCTCGTCCAGGATTCCACCTCGTGGTGGAACCGAGCGCTGA 2898 42.79 MSTFTKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLEKIMFKYVELCVDMRRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFMHLSSEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRATEFRRLCEIIRNHLSNLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELKLWQEAFRSVEDIHGLMCIVKKTPKSSLMVVYYAKLTEIFWISSSHLYHAYAWFKLFTLQKSFNKNLNQKDLQLIASSVVLAALSVSPYDRTLGASHVELENEKERNLRMANLIGFNLDSKYDSREVLSRSNLLSELVSKGVLSCATQEVKDLYHLLEHEFLPLDLATKLQPLLTKLSKLGGKLSSASSVPEVQFSQYVNALEKLATLRVLQQVSQVYQSMKIESLSRMISFFDFSAVEKIAVDAVKHNFVAMKVDHTRGVVVFGNVGFESDGIRDHLSTFAEHLNKARAMIYPPITKASKTEQMLASLADVVEKEHKKLLARKSIIEKRKEEQERHHLEMEREEESKRIKLQKITEEAEQKRLASEYEQRKNQRILREIEERELEEAQALLQEAEKRGGKKKGKKPILEGEKVTKQTLMELALSEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAFQQRIVEERELHEREQQLEVELSKQRHEGDLKEKIRLIRMVDNKKIFQEKVMSRRKEEFDRRRAERDEQIQQIIQFKRQERDSKRKKIFYVRREEERLRKLHEEEEAQKRELAEKQKRDEAERKAKLDVIAEKQRQREREIEEKERMRREALLGKSNDGANRSSETPASLPLESRPVAPAAAAAAATTAAPAAAPAPVKYVPRHMRERAEISGEAPPPPSDRWGRQDDRASQPTDRWRPGSRSSWSSSRIPPRGGTER 965
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23925006 23930959 + Bma011924.1 Bma14g01308 95289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01308 965 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 944 IPR027512 GO:0005852
Bma14g01308 965 Coils Coil 568 593 - -
Bma14g01308 965 Coils Coil 798 831 - -
Bma14g01308 965 MobiDBLite consensus disorder prediction 807 862 - -
Bma14g01308 965 MobiDBLite consensus disorder prediction 943 965 - -
Bma14g01308 965 Coils Coil 615 642 - -
Bma14g01308 965 MobiDBLite consensus disorder prediction 807 965 - -
Bma14g01308 965 Coils Coil 668 698 - -
Bma14g01308 965 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 919 - -
Bma14g01308 965 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Bma14g01308 965 Gene3D - 268 343 - -
Bma14g01308 965 Gene3D - 361 493 - -
Bma14g01308 965 Pfam PCI domain 373 509 IPR000717 -
Bma14g01308 965 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 919 IPR027512 GO:0005852
Bma14g01308 965 Coils Coil 715 735 - -
Bma14g01308 965 MobiDBLite consensus disorder prediction 928 942 - -
Bma14g01308 965 SMART PINT_4 441 532 IPR000717 -
Bma14g01308 965 Coils Coil 93 120 - -
Bma14g01308 965 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Bma14g01308 965 Coils Coil 837 857 - -
Bma14g01308 965 Gene3D UVR domain 217 267 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01308 K03254 - csin:114278930 1375.15