Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01317 ATGTCGTTGGAAAAGTTGATTGCTGCCGGTGCTCCTCAGTCTGAGGCAGCGCCGCCGGAATCTATTTCTGTCTCTCACTCGTTCCGGCAATGGAGCGAAGATACTTGGATTTTCGAGGAGCTTCCCACGGCAGACATTGTCTCGGTGTCCCCTCCTGATTCTGCAGATTTTAGCCCCATGCTGCTGTCTTACACTATTGAGATTCACTATAAACAGTTTAAGTGGCGCTTGGTGAAGAAAGCTTCACAGGTTCTTTACTTACATTTTGCTTTGAAGAAACGTGCTATTATTGAAGATATTCAAGAGAAACAAGAGCAGGTGAAAGAATGGCTTCAAAGTTTAGGAATAGTAGATCAAGCAGCAGTTGTCCTTGACGCTGATGATGGAGCCTTTCCTTTACACAGCGAAGATGGTGTCAGAAACAGGGACGTTCCATCCATTGCTGCTTTACCAATCATTCGGCCAGCACTGGGAAGGCATCAGAGCATTTCAGACACGGCAAAGATAGCAATGCAGAATTATTTGAACCATTTTCTTGGAAACATGGACATTGTGAATTCTCGTGAGGTCTGCAAATTTCTAGAAGTCTCCAAAATGTCATTCTTAAGAGAATACGGTCCGAAGTTGAAGGAAGGCTATTTAATGGTGAACCATTTGAAGAAGCTTTCTAGAGTAGATTCTGCTTTAAAATGTTTTCCTTTCTTTTGTTTTGGTTGCTGGGAAGACGATTGGAAAAAGGTCTGGGGTGTTTTAAAACCTGGATTCTTGGCTCTCCTGGATGACCCATTCAATGCTAACCTTTTAGATATAATAGTTTTTGATGTCCTGCCTGCCGTAGATGGAAAAAAGGCTCCTAAAGTTTGTTTAGCAAATGTTGTCAAAGAGCACAATCCTATAAGGTATTCATTTAAGGTTACACAAGGAAATGGCAGCATGAAGATTAGAACCACTAGTAGTGTTAAAGCTAAAGACTGGATTTCAGCAATTAATGATGCTGGTATGAGGCCTCTGGAGGGTTGGTGTAGTCCTCATCGCTTCGATTCCTATGCTCCTCAAAGAGGTCTGAGCAATGATGGTAGCCAAGGTCAATGGTTTATAGATGGCAAAGCAGCATTTGAAGCGATTGCTTCTGCCATTGAGAATGCAAAATCCGAGATATTCATGACTGGTTGGTGGCTTTGTCCAGAGCTTTATCTACGGCGTCCTTTTGATCTTCATTCTTCCTCGCGACTCGATACATTACTGGAAGCAAAAGCGAAGGGTGGGGTTAAGATTTACATTCTTCTTTACAAGGAGGTTCCTCTTGCTTTAAAGATTAACAGTATGTATAGTAAGAAGAGATTCCTTAATATCCACGAGAATGTAAGGGTACTACGCTACCCCGATCATATTTCAACTGGAGTTTATTATTGGTCGCATCATGAAAAACTTGTGATTGTTGATTACCGGATTTGTTTTATTGGGGGTTTAGATTTATGCTTTGGCAGATATGACACGAGGGAACACAGAGTGGGTGACTGCCCCCCTCAAATATGGCCTGGAAAAGACTATTACAACCCAAGAGAATCAGAACCAAATTCTTGGGAAGATACAATGAAAGACGAATTGGAGCGTGAAAAATATCCTCGTATGCCGTGGCATGATGTTCATATTGCTCTTTGGGGACCATCCTGCTGTGATATTGCAAGGCATTTTGTTCAACGTTGGAACCATGCTAAGAGAAATAAAGCCCCAAATGAACAAACAATTCCTCTACTAATGCCTCATCATCATATTGTCATCCCTCATTACATGGGAAGAAGTGAAGAAATGGACATTTCAAAGAACACCAGAGAAGAAGACGTAAACAGACAGGATTCCTTTCTATCGCGATCATCCCTTCAAGATATCCCATTACTTTTGCCTCAGGAAGCTGATAGACTTCTGAATTCCAATGTTCAAACGAAGCTGAATGGTCTGCCTGAGAATCCTAATCTTCATGAACAGTTGACTGAGGTTGGAGGAAGTTTTTCATTTTCTCACCAAAATCCTAAAGTTGAGTCCTTATCTCCGCATGCACAGTCGAAAGACTTTGAAGATGATTTTGAGTTCATGACTACTTTTGATAGCGAGAGGAGGTCAGATGACGAAGACCATGACGTTGAAGATGACACTGGAGAAGTTGGTCCTCCTGTAGCATGTCGTTGTCAGGTAGTAAGAAGTGTCAGCTATTGGTCAGCTGGAACTGGTAAACCAGAAGAAAGCATTCATAAAGCTTACTGTTCCCTCATCGAGGAGGCAGAACATTTTATATACATAGAGAATCAATTTTTTATATCAGGTCTTTCAGGAGATGAAATTGTACAAAATCGTATACTAGAAGCACTATATCGACGTATTTTACGGGCATATAAAAGTGATAAATGTTTTAGGGTCATTGTTGTCATACCACTCATACCTGGATTTCAGGGTGGCGTGGATGACAATGGAGCAGCAACTGTACGAGCCCTGATGCATTGGCAATATCGAACAATAAGCCAGACAAAGACTTCAATAATGCATAATCTCAATGCTCTACTCGGTCCTAAAGCACATGATTACATCTCATTTTACGGCCTCAGATCACATGGTATACTTTTTAATGGCGGCCCTATTGCGACAAGTCAGGTGTACGTTCACAGCAAATTGATGATAATTGATGATAGAATTTCAGTGATTGGATCGTCAAATATTAACGATAGGAGTTTGCTTGGATCAAGAGACTCAGAGATTGCGATGGTGCTCGAGGATAAAGAGTTTGTTGAGTCAGCAATGGATGGAAAACCATGGAAAGCTGGGAAATTTTCTTACAGCCTTCGATGCGCTTTGTGGTCTGAGCACCTTGGTCTTCAACCAAGAGAGATTGATAAAATCAGCGATCCAGTAGCAGAAACAACATATAGAGATTTATGGGTAGCAACAGCAAAGGAGAATACAAGGATCTATCAAGATGTCTTTGGCTGCATTCCAAATGATAATATAAAATCAAGATCAGCTTTAAGACAGAACATGGCTTTTTGGAAGGAGAAACTTGGTCACACTACCATAGATTTAGGGCTAGCCTCGGAGAAGCTCGAAACCTGCGAGAATGGAGGAGAAGTTAAGGTCACAGATTTAGGGGAGGTGCTTAAGTCTGTGAGGGGATTTCTTGTTTGTTTCCCATTAGAGTTCATGAGTCAAGAAGATTTAAGGCCATTTTTCAATGAAAGTGAGTTTTATGCTCCTCAGGTGTTTCTTTAA 3258 41.31 MSLEKLIAAGAPQSEAAPPESISVSHSFRQWSEDTWIFEELPTADIVSVSPPDSADFSPMLLSYTIEIHYKQFKWRLVKKASQVLYLHFALKKRAIIEDIQEKQEQVKEWLQSLGIVDQAAVVLDADDGAFPLHSEDGVRNRDVPSIAALPIIRPALGRHQSISDTAKIAMQNYLNHFLGNMDIVNSREVCKFLEVSKMSFLREYGPKLKEGYLMVNHLKKLSRVDSALKCFPFFCFGCWEDDWKKVWGVLKPGFLALLDDPFNANLLDIIVFDVLPAVDGKKAPKVCLANVVKEHNPIRYSFKVTQGNGSMKIRTTSSVKAKDWISAINDAGMRPLEGWCSPHRFDSYAPQRGLSNDGSQGQWFIDGKAAFEAIASAIENAKSEIFMTGWWLCPELYLRRPFDLHSSSRLDTLLEAKAKGGVKIYILLYKEVPLALKINSMYSKKRFLNIHENVRVLRYPDHISTGVYYWSHHEKLVIVDYRICFIGGLDLCFGRYDTREHRVGDCPPQIWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHIALWGPSCCDIARHFVQRWNHAKRNKAPNEQTIPLLMPHHHIVIPHYMGRSEEMDISKNTREEDVNRQDSFLSRSSLQDIPLLLPQEADRLLNSNVQTKLNGLPENPNLHEQLTEVGGSFSFSHQNPKVESLSPHAQSKDFEDDFEFMTTFDSERRSDDEDHDVEDDTGEVGPPVACRCQVVRSVSYWSAGTGKPEESIHKAYCSLIEEAEHFIYIENQFFISGLSGDEIVQNRILEALYRRILRAYKSDKCFRVIVVIPLIPGFQGGVDDNGAATVRALMHWQYRTISQTKTSIMHNLNALLGPKAHDYISFYGLRSHGILFNGGPIATSQVYVHSKLMIIDDRISVIGSSNINDRSLLGSRDSEIAMVLEDKEFVESAMDGKPWKAGKFSYSLRCALWSEHLGLQPREIDKISDPVAETTYRDLWVATAKENTRIYQDVFGCIPNDNIKSRSALRQNMAFWKEKLGHTTIDLGLASEKLETCENGGEVKVTDLGEVLKSVRGFLVCFPLEFMSQEDLRPFFNESEFYAPQVFL 1085
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 24301806 24308906 - Bma011938.1 Bma14g01317 95298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01317 1085 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 469 496 IPR001736 GO:0003824
Bma14g01317 1085 PANTHER PHOSPHOLIPASE D ZETA 2 25 1082 - -
Bma14g01317 1085 Gene3D Endonuclease Chain A 357 592 - -
Bma14g01317 1085 Gene3D - 208 335 IPR011993 -
Bma14g01317 1085 SUPERFAMILY Phospholipase D/nuclease 333 589 - -
Bma14g01317 1085 SMART PH_update 208 336 IPR001849 -
Bma14g01317 1085 SUPERFAMILY PH domain-like 240 332 - -
Bma14g01317 1085 SUPERFAMILY Phospholipase D/nuclease 721 931 - -
Bma14g01317 1085 Gene3D Endonuclease Chain A 705 944 - -
Bma14g01317 1085 SMART pld_4 881 908 IPR001736 GO:0003824
Bma14g01317 1085 SMART pld_4 469 496 IPR001736 GO:0003824
Bma14g01317 1085 CDD PH_PLD 185 332 - -
Bma14g01317 1085 CDD PLDc_vPLD1_2_yPLD_like_1 363 507 - -
Bma14g01317 1085 Pfam Phospholipase D Active site motif 471 496 IPR001736 GO:0003824
Bma14g01317 1085 ProSiteProfiles PH domain profile. 207 334 IPR001849 -
Bma14g01317 1085 PIRSF PLD_euk 43 1084 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bma14g01317 1085 Pfam PLD-like domain 754 928 IPR025202 -
Bma14g01317 1085 PANTHER PHOSPHOLIPASE D 25 1082 IPR015679 -
Bma14g01317 1085 CDD PLDc_vPLD1_2_yPLD_like_2 741 925 - -
Bma14g01317 1085 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 881 908 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01024 Bma-Chr5:48786210 Bma14g01317 Bma-Chr14:24301806 0 dispersed
Bma14g01317 Bma-Chr14:24301806 Bma15g00335 Bma-Chr15:3307069 3.25E-15 dispersed
Bma14g01317 Bma-Chr14:24301806 Bma09g00903 Bma-Chr9:48415787 8.14E-16 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01317 K01115 - qsu:112029457 1543.1