Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01344 ATGGATCCTCAAGGACCAAGCCAACCTCCGTCAATGGGGGTTGTTGGGGGCGGGCTTCAATTTCCATACGGTTCGAGTTTTTACGAGCCGAATCAGATCACTGGAAACCAAAGTTCAGGGCCGATGATGGGAGCCGTTCAATCCGCAAGCCAGCCCGGGGGACCCCAGCTAGCATTTCAGCAGATGCACCAGCAACTCCAGCAACAGCTCCAGAACTTCTGGGAGAATCAGAGCCGTGAAATCGAGAAGGTGACAGATTTCAAAAACCATAGTCTCCCATTGGCCAGGATCAAGAAGATCATGAAGGCGGATGAAGATGTGCGGATGATCTCGGCCGAGGCCCCCGTCGTGTTTGCCAGGGCATGTGAAATGTTCATCTTGGAATTGACCCTCCGATCATGGAATCACACGGAGGAGAACAAAAGGAGGACGCTCCAGAAAAACGACATCGCAGCCGCAATCACGAGAACTGATATCTTTGACTTTTTGGTTGACATTGTCCCGAGGGACGATCCGAAAGACGAAGTGCTCGCCTCCTTCCCTCGGGGAGCTATGCCGGTTGGGGCCCCAGTCGACGGGATCCCGTACGACATGCCACCTCAGCATCCAGGGATGATGGCAGGGATGTACGCCCCTCCACCTCACCCCTATATGGTCCCGCAAATGTGGCCCCACGTACCGGATCAACATCAATCGAGTTCCGATCAGTAG 711 54.43 MDPQGPSQPPSMGVVGGGLQFPYGSSFYEPNQITGNQSSGPMMGAVQSASQPGGPQLAFQQMHQQLQQQLQNFWENQSREIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDPKDEVLASFPRGAMPVGAPVDGIPYDMPPQHPGMMAGMYAPPPHPYMVPQMWPHVPDQHQSSSDQ 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 24851229 24851939 - Bma011974.1 Bma14g01344 95325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01344 236 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 236 - -
Bma14g01344 236 Pfam Core histone H2A/H2B/H3/H4 58 154 IPR007125 GO:0003677
Bma14g01344 236 Gene3D Histone, subunit A 56 169 IPR009072 GO:0046982
Bma14g01344 236 SUPERFAMILY Histone-fold 66 163 IPR009072 GO:0046982
Bma14g01344 236 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 1 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00812 Bma-Chr5:45432641 Bma14g01344 Bma-Chr14:24851229 3.56E-32 dispersed
Bma11g00317 Bma-Chr11:2976158 Bma14g01344 Bma-Chr14:24851229 1.33E-11 dispersed
Bma14g01344 Bma-Chr14:24851229 Bma08g00818 Bma-Chr8:45893581 2.12E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58377 PF00808 CBFD_NFYB_HMF 3.90E-18 CL0012 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01344 K08066 - csv:101209664 313.923