Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01349 ATGAATGAGAATGAGATTTTCAGCCCGTCTATGGCGGTTATAGTCGTGGTCCTCGTCGCTTCCGTTTTCTTCATGGTTTTCTTCTTGGTCTACATCCGGCAGTGCTCCAGTTTGCAAGCGGAGGGCGGAAGCATCAGAAACTTTCCGGGGAGATCGAGACGCGCCGCTCGAGGCCTCGATGCGAGCATGATCAGTACGTTTCCTACCTTCTTCTACTCTGAGGTGAAGGCGCTAAAGAAGGGGCGAGAGGCGCTGGAATGCGCCGTTTGTTTGAACGAATTCGAGGAGGACGAAATGCTGCGGTTGATTCCCCAGTGTGATCACGTGTTCCACCCTGAGTGCATCGACGCCTGGTTAGAGTCCCACACCACCTGTCCGGTTTGCCGAGCCAACCTGGCCCCGAAGACTGGCGACTCGGAAGTTCAGCCCACTGAGTCCACAGACGAGACTGACGTCGAGAACCAAGTAGTCGCCGTCGAGGAACAACAGCCGGTTTCTCCTCCTCATGCGATAGAGGATGATTCTCCGGTGCTGAAGATGTTGAACGGGAACAGTACTCGTAGCCCTAGATCGAGCAGATTGCGGTGGTTCTATCCTCGTTCTCACTCCACCGGTCACTCACTAGTCCAACCGGGGGAAAATACGTCGAGGTTCACGCTGAGATTGCCAGTGGAGGTAAGAAAGCAATTAATGAACCGGCAACTGCACCGGGCGACGAGCTTGGTGGTTTTGCCAAGGGAAATCAGTTCACGGCGAGGATTCAGATTCGGTGGTGGTGAAGGGAGCGGTCGAGGGAAGTCCTCCCGCCGGCTTGATCGGACGGAAATGTCAAAATCCGACAGGTGGGTGTTTTCCGTGACTCCGCCATTTTTCACGAGGATGTCGTCAATAAAGACAGCCAAGGTGTCGACGGACGGCGGCGAAGGGAACATCGGCGGTGGAATCTAA 948 54.96 MNENEIFSPSMAVIVVVLVASVFFMVFFLVYIRQCSSLQAEGGSIRNFPGRSRRAARGLDASMISTFPTFFYSEVKALKKGREALECAVCLNEFEEDEMLRLIPQCDHVFHPECIDAWLESHTTCPVCRANLAPKTGDSEVQPTESTDETDVENQVVAVEEQQPVSPPHAIEDDSPVLKMLNGNSTRSPRSSRLRWFYPRSHSTGHSLVQPGENTSRFTLRLPVEVRKQLMNRQLHRATSLVVLPREISSRRGFRFGGGEGSGRGKSSRRLDRTEMSKSDRWVFSVTPPFFTRMSSIKTAKVSTDGGEGNIGGGI 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 25030743 25031690 - Bma011984.1 Bma14g01349 95330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01349 315 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL6 5 249 - -
Bma14g01349 315 PANTHER RING FINGER DOMAIN-CONTAINING 5 249 - -
Bma14g01349 315 CDD RING-H2_EL5_like 86 129 - -
Bma14g01349 315 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 135 IPR013083 -
Bma14g01349 315 SUPERFAMILY RING/U-box 67 137 - -
Bma14g01349 315 Pfam Ring finger domain 86 129 IPR001841 -
Bma14g01349 315 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Bma14g01349 315 SMART ring_2 87 128 IPR001841 -
Bma14g01349 315 MobiDBLite consensus disorder prediction 252 274 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma13g00490 Bma14g01349 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00185 Bma-Chr2:1721985 Bma14g01349 Bma-Chr14:25030743 1.82E-11 dispersed
Bma13g00490 Bma-Chr13:9186924 Bma14g01349 Bma-Chr14:25030743 3.82E-145 dispersed
Bma14g01349 Bma-Chr14:25030743 Bma13g00255 Bma-Chr13:4018789 2.14E-169 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01349 K10664 - zju:107411967 310.842