Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g01358 | ATGTACTTGTCGGAGAAGCCCCGTCCAATTGATTTCTACAAAGAGGGAGAACCGGAAAGAGACATGCTGATCGAGGTGGTGACGAATGAGAGTCTGCCGCCTCACCATCATCACAACCACCAGCACAACATGATTCTCGCAGATAGCAGTGGGGGCGAGGAGCCGGAAGTGAAAGCGCCGAAGAAACGGGCCGAGACTTGGGTCCAGGAAGAGACTCGGAGCCTGATAAGCTTTCGACGGCAAGTCGATGGACTTTTCAACACTTCAAAGTCCAACAAGCACCTATGGGAACAAATCTCGGCAAAAATGAGAGATAAGGGTTTCGATCGCTCGCCGACGATGTGTACAGATAAGTGGAGGAATTTGCTAAAAGAGTTCAAGAAAGCGAGACACCAAGCTAAAGGTGGCAGCAAATCGGCAAAAATGTCGTATTACGAGGAGCTGGAGGAGCTGCTTAGAGATAGAACAAAAAATTCTGGGGCATATAAGAGCCCCACTCCCCTTAAGGTCGAATCTTACATTCAATTTGCTGATAAGGGTGAGGATTTTTTTTAA | 555 | 47.93 | MYLSEKPRPIDFYKEGEPERDMLIEVVTNESLPPHHHHNHQHNMILADSSGGEEPEVKAPKKRAETWVQEETRSLISFRRQVDGLFNTSKSNKHLWEQISAKMRDKGFDRSPTMCTDKWRNLLKEFKKARHQAKGGSKSAKMSYYEELEELLRDRTKNSGAYKSPTPLKVESYIQFADKGEDFF | 184 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 25261654 | 25262208 | + | Bma011994.1 | Bma14g01358 | 95339 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g01358 | 184 | PANTHER | - | 4 | 182 | - | - | |
Bma14g01358 | 184 | SUPERFAMILY | Homeodomain-like | 65 | 125 | IPR009057 | - | |
Bma14g01358 | 184 | PANTHER | TRIHELIX TRANSCRIPTION FACTOR GT-4 | 4 | 182 | - | - | |
Bma14g01358 | 184 | CDD | GT1 | 65 | 130 | - | - | |
Bma14g01358 | 184 | SMART | sant | 63 | 125 | IPR001005 | - | |
Bma14g01358 | 184 | ProSiteProfiles | Myb-like domain profile. | 59 | 123 | IPR001005 | - | |
Bma14g01358 | 184 | MobiDBLite | consensus disorder prediction | 46 | 65 | - | - | |
Bma14g01358 | 184 | Pfam | Myb/SANT-like DNA-binding domain | 66 | 151 | IPR044822 | - | |
Bma14g01358 | 184 | Gene3D | - | 67 | 129 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma13g00573 | Bma-Chr13:12201969 | Bma14g01358 | Bma-Chr14:25261654 | 2.09E-113 | dispersed | |
Bma14g01358 | Bma-Chr14:25261654 | Bma04g00367 | Bma-Chr4:2943805 | 2.75E-12 | dispersed | |
Bma14g01358 | Bma-Chr14:25261654 | Bma01g02505 | Bma-Chr1:82747969 | 1.37E-07 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58378 | PF13837 | Myb_DNA-bind_4 | 2.80E-20 | CL0123 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g01358 | - | - | csin:114259349 | 261.536 |