Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01358 ATGTACTTGTCGGAGAAGCCCCGTCCAATTGATTTCTACAAAGAGGGAGAACCGGAAAGAGACATGCTGATCGAGGTGGTGACGAATGAGAGTCTGCCGCCTCACCATCATCACAACCACCAGCACAACATGATTCTCGCAGATAGCAGTGGGGGCGAGGAGCCGGAAGTGAAAGCGCCGAAGAAACGGGCCGAGACTTGGGTCCAGGAAGAGACTCGGAGCCTGATAAGCTTTCGACGGCAAGTCGATGGACTTTTCAACACTTCAAAGTCCAACAAGCACCTATGGGAACAAATCTCGGCAAAAATGAGAGATAAGGGTTTCGATCGCTCGCCGACGATGTGTACAGATAAGTGGAGGAATTTGCTAAAAGAGTTCAAGAAAGCGAGACACCAAGCTAAAGGTGGCAGCAAATCGGCAAAAATGTCGTATTACGAGGAGCTGGAGGAGCTGCTTAGAGATAGAACAAAAAATTCTGGGGCATATAAGAGCCCCACTCCCCTTAAGGTCGAATCTTACATTCAATTTGCTGATAAGGGTGAGGATTTTTTTTAA 555 47.93 MYLSEKPRPIDFYKEGEPERDMLIEVVTNESLPPHHHHNHQHNMILADSSGGEEPEVKAPKKRAETWVQEETRSLISFRRQVDGLFNTSKSNKHLWEQISAKMRDKGFDRSPTMCTDKWRNLLKEFKKARHQAKGGSKSAKMSYYEELEELLRDRTKNSGAYKSPTPLKVESYIQFADKGEDFF 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 25261654 25262208 + Bma011994.1 Bma14g01358 95339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01358 184 PANTHER - 4 182 - -
Bma14g01358 184 SUPERFAMILY Homeodomain-like 65 125 IPR009057 -
Bma14g01358 184 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 4 182 - -
Bma14g01358 184 CDD GT1 65 130 - -
Bma14g01358 184 SMART sant 63 125 IPR001005 -
Bma14g01358 184 ProSiteProfiles Myb-like domain profile. 59 123 IPR001005 -
Bma14g01358 184 MobiDBLite consensus disorder prediction 46 65 - -
Bma14g01358 184 Pfam Myb/SANT-like DNA-binding domain 66 151 IPR044822 -
Bma14g01358 184 Gene3D - 67 129 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00573 Bma-Chr13:12201969 Bma14g01358 Bma-Chr14:25261654 2.09E-113 dispersed
Bma14g01358 Bma-Chr14:25261654 Bma04g00367 Bma-Chr4:2943805 2.75E-12 dispersed
Bma14g01358 Bma-Chr14:25261654 Bma01g02505 Bma-Chr1:82747969 1.37E-07 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58378 PF13837 Myb_DNA-bind_4 2.80E-20 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01358 - - csin:114259349 261.536