Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01370 ATGGCCAGTGGTGGGGGTGGCGCAGAAGCGCAGTATGTGAAGGCTAAGACGTCTGTCTGGTGGGACATCGAGAATTGTGCGGTACCCAAGGGCTGCGACGCCCATAGCATTGCTCAGAATGTTAGCTCTGCCCTCTCTAACCTCAATTATCGCGGCCCTCTCTCTATTTCTGCCTATGGGGATACCACTCGCATCCCTCACTCCATCCAGCAAGCGCTTTCCTCCACCGGAGTATCCCTCAACCACGTCCCTTCCGGTGTTAAAGATGCAAGTGACAAGAAGATTCTGGTAGACATGCTACTTTGGGCTGTGGACAATCCTTCTCCTGCTAACTATCTGTTAATATCTGGGGATCGAGATTTCTCTAATGCTCTTCATCAGTTGGGCATGAGAAGATACAATATCCTTCTAGCACAACCACTTAAAGCATCTGTACCACTCCTCAAAGCTGCCAAGATCGTATGGCTATGGACCAGTCTTGCCGCCGGAGGACCACCTCAAACAAACACTGAACTACAACAACTTCTTAATAATAGCTCTGCCTCAACTTCTGATACCTCGCCCAGTCCACCCTGTCCAGTCACCATTGCCTCTCAAATTCATCAACCAATGGGTGCTCCCCATTTTCAAGACCTTAAAACAGGAAAACAATCTCCTAAATTTAAGGGAAAAGTACCTAGGAGAAACTTTAGTCAACCAAATGTATTAAAACCAAAAAAATTTCCGATCGAGAGTCAAGATGATCAAGGCACTGTCAATCCTCGCCAATTTGTTAATTCATGTTCGAATGCCCCCTCTATGAGTCGGCCTCCAACACATTTTCCGCCGTTCAATCCTGATCTTTCGAGGAGCAACATCAATAATCCTCAGAGCAGCTATCAGAATTCATCCCCCCATTCCATAAGGCCTGACATCCATTCTTCACAACCTGCAAACTCACCTTCAAATATGTACTACCCATCTAATCTTCACTCCAATGTTTCTCCAATCCCTCCTACACCTGGCTTCTCATCAGGTTTTGCTACAAGTGTGCCTGATTTTAGTAGTTTGAATATTTCTGGTTCTTTTAGCAGCACCCATCATGTCCATGGTGATCGACCTCCGAATGGAGAACAATTGCACAATTTTACGAACAACTATCCAAATTCTATGTACTTCAGTGAATCAAAGAAGGGGATCCCAATCCCGTATTCATATTCTGAAGACAATTGGAACGACAATTGGAACACTCAATGTATGGAGTTTTCATCCACATCAGCTGAAGCCGCAAGTTCATGTAGCTCTAACAATATCCAATGGGGATCTCTAGGCTGTCCAAAACCTTCCGAGAGTGTACAAGGGCATATAGGAATTATCTTATGTGCCTTGAACACCCTGAAAAACGAAAAGATAATGCCAACTGAAGCAAACATAGCTGATTGCATAAGGTTTGGAGAACCCAAACAACATCAGATTGATATAAAGAAAGCCCTGACAAGTGCTATTGAGCATCAAATGGTTGTGATGCAGAATCTAGGTGCACTGCAGTTTTATATCGGTAAGAACGACGTACTATGGAAATGTGTAAACCCATTGGGTGGAAACACTAATCAGTTTTCCACAGATATATGGAATAGAATCCAACAATTTTTAACATCATCTGCTGGGCGAACTGCTATAATGGTTTCACAGTGCAGTAGGTATGAAGCAGGCACAATATTGAAGAGCATGTGCTTGAAAGAGCTTATTTTGGGCGAAATACTTCAGATTCTGAATATGGTAATAACTGTGAAGAAGTGGATTGTCCATCATCACTCGGGATGGCAACCACTAAAAATTGTTCTTGCTTAG 1830 43.66 MASGGGGAEAQYVKAKTSVWWDIENCAVPKGCDAHSIAQNVSSALSNLNYRGPLSISAYGDTTRIPHSIQQALSSTGVSLNHVPSGVKDASDKKILVDMLLWAVDNPSPANYLLISGDRDFSNALHQLGMRRYNILLAQPLKASVPLLKAAKIVWLWTSLAAGGPPQTNTELQQLLNNSSASTSDTSPSPPCPVTIASQIHQPMGAPHFQDLKTGKQSPKFKGKVPRRNFSQPNVLKPKKFPIESQDDQGTVNPRQFVNSCSNAPSMSRPPTHFPPFNPDLSRSNINNPQSSYQNSSPHSIRPDIHSSQPANSPSNMYYPSNLHSNVSPIPPTPGFSSGFATSVPDFSSLNISGSFSSTHHVHGDRPPNGEQLHNFTNNYPNSMYFSESKKGIPIPYSYSEDNWNDNWNTQCMEFSSTSAEAASSCSSNNIQWGSLGCPKPSESVQGHIGIILCALNTLKNEKIMPTEANIADCIRFGEPKQHQIDIKKALTSAIEHQMVVMQNLGALQFYIGKNDVLWKCVNPLGGNTNQFSTDIWNRIQQFLTSSAGRTAIMVSQCSRYEAGTILKSMCLKELILGEILQILNMVITVKKWIVHHHSGWQPLKIVLA 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 25452390 25454632 - Bma012006.1 Bma14g01370 95351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01370 609 MobiDBLite consensus disorder prediction 206 320 - -
Bma14g01370 609 CDD PIN_limkain_b1_N_like 16 140 - -
Bma14g01370 609 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 3 601 - -
Bma14g01370 609 Pfam OST-HTH Associated domain 559 607 IPR025677 -
Bma14g01370 609 Pfam NYN domain 16 151 IPR021139 GO:0004540
Bma14g01370 609 PANTHER LIMKAIN B LKAP 3 601 IPR024768 GO:0005777|GO:0010468|GO:1903231
Bma14g01370 609 MobiDBLite consensus disorder prediction 357 376 - -
Bma14g01370 609 MobiDBLite consensus disorder prediction 278 320 - -
Bma14g01370 609 Gene3D - 9 158 - -
Bma14g01370 609 MobiDBLite consensus disorder prediction 246 268 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00530 Bma-Chr6:27251741 Bma14g01370 Bma-Chr14:25452390 4.31E-38 dispersed
Bma12g00451 Bma-Chr12:11391396 Bma14g01370 Bma-Chr14:25452390 8.22E-31 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01370 - - rcu:8274957 602.823