Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01376 ATGGATGAACATCCTGCCATGGATTCTGCAGAAAGCAACGTCAGACGTAGCATGGAAGCTGGAGCTCAAGAAGAAGAAGAAGAAGACGGCAAAGACCCAGAAAGCATGCCGCTGAATCAGCCACTCCTCAAAAGAAACCGAACACTCTCGTCCAGTCCACTCGCCATCATTGGAACCAAAGTTTCCTACATAGAAAGCTTGGATTATGAGATCAACGAGAACGACTTGTTCAAACATGATTGGAGAAGCAGATCCAGAGTTCAAGTACTACAATATATATTCTTGAAATGGACACTAGCTTTCCTCGTCGGACTTCTCACTGGAATCATTGCCTCGGTGATCAATCTTGCCATAGAGAACATTGCCGGATACAAGCTTCTTGCCATTGTCGGCTTCATAGAAGAGGACAGATATGTAATGGGATTCGTCTATTTTACCTTAGCAAATTTTCTTCTGACTATGGTTGCTGCCGTGCTGTGCGTGTGCTTCGCACCCACTGCTGCTGGACCTGGAATACCAGAAATCAAAGCTTACCTCAATGGAGTTGACACTCCAAACATGTATGGTGCAACAACATTGATAGTCAAGATAATTGGAAGCATCGGAGCAGTTGCTGCAGGCCTGGATCTTGGAAAAGAAGGACCTTTGGTGCACATCGGTAGCTGCATTGCTTCCTTACTCGGCCAAGGTGGTCCTGATAAATACCGGATAAAATGGGGATGGATTCGCTATTTCAACAATGACCGGGACCGAAGAGATCTTATAACTTGTGGGGCTTCCTCGGGCGTTTGTGCGGCCTTCAGGGCTCCGGTTGGTGGTGTTTTGTTTTCACTAGAGGAGGTTGCTACGTGGTGGAGGAGTGCATTGCTGTGGAGAACTTTCTTCAGCACAGCAGTGGTGCTGGTAGTGTTGAGAGCATTCATTGAAATATGCAATTCTGGAGAATGTGGGCTTTTTGGAAAGGGAGGGCTTATTATGTTTGATGTAAGCAATGTTTCACTTAGATATCATGTGATGGACATCATCCCTGCATCTATCATTGGTATCATTGGTGGAGTTCTTGGAAGCCTTTACAACCATCTCCTACACAAGGTTCTAAGACTCTACAATCTCATCAATCAGAAGGGAAAAGTGCATAAGCTCCTTCTCACCATTGCTGTGTCAATCTTCACTTCAGTCTGCCTTTACTGCCTTCCTTTTCTTGCCAAATGCACCCCTTGTGATTCCTCCCTTACTGATTCCACCTGCCCCACAACTGGTCGATCAGGCAATTTCAAACAATTCAACTGCCCAAGCGGCCACTACAATGACCTAGCAACTCTACTTCTTACAACAAACGATGATGCTGTGCGAAATATATTCTCGACCAACACTTCCACAGAATATCACCCTTTGTCTCTTTTAATCTTTTTCGCAGTCTATTGTATCTTGGGATTAATTACCTTTGGCATTGCTGTGCCATCTGGACTTTTTCTCCCAATTATCTTGATGGGATCTGCTTATGGTCGCTTACTAGGCATGGCTATGGGATCTTATACCAACATTGATCAGGGGCTTTATGCTGTTTTGGGTGCAGCCTCACTCATGGCAGGCTCAATGAGAATGACTGTTTCTCTTTGTGTGATATTCCTTGAACTCACCAACAACCTTCTCTTACTACCCATAACAATGATTGTCCTTCTGATTGCAAAAACTGTAGGAGACAGTTTTAACCCAAGCATCTATGAGATAATTCTGCACTTGAAAGGCTTGCCTTTCTTGGAATCCAATCCAGAGCCATGGATGAGAAATATTACCGTCGGGGAGCTTGTTGATGCAAAGCCGGGTGTGATTACTCTATGCGGCATAGAAAAGGTGGCCCGAATTGTGGATGTTCTAAAGAACACGACACATAATGGTTTCCCTGTAGTGGATGGTGGGGTGGCACTACCTGGGAGAACTGCTGTTGGCGCCACACAACTGCATGGATTAATCCTAAGAACTCACCTGGTTCAGGCGCTGAAAAAAAAGTGGTTCTTGAGACAAAAAAGGAGAACTGAAGATTGGGAAGTGAGAGAAAAGTTTACATGGGTTGATTTGGCAGAGAGAGAACTTAAGATTGAGGAAGTAGCTGTGACAAGTGATGAAATGGAGATGTATGTCGATCTTCATCCTCTTACTAACACAACGCCTTACACAGTGGTAGAGAGCATGTCAGTGGCCAAAGCTTTGGTGCTTTTCAGACAAGTAGGTCTACGTCATTTGATTGTCGTACCTAATTATCAAGCAACTGGGGTGCCTCCAGTAGTAGGGATTCTGACCAGGCAAGATTTGATGGCTTACAACATTCTGATGGCCTTCCCCAATATTGCAAGGCCAAAGAGTGAAGGCAAA 2373 44.8 MDEHPAMDSAESNVRRSMEAGAQEEEEEDGKDPESMPLNQPLLKRNRTLSSSPLAIIGTKVSYIESLDYEINENDLFKHDWRSRSRVQVLQYIFLKWTLAFLVGLLTGIIASVINLAIENIAGYKLLAIVGFIEEDRYVMGFVYFTLANFLLTMVAAVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDKYRIKWGWIRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVLVVLRAFIEICNSGECGLFGKGGLIMFDVSNVSLRYHVMDIIPASIIGIIGGVLGSLYNHLLHKVLRLYNLINQKGKVHKLLLTIAVSIFTSVCLYCLPFLAKCTPCDSSLTDSTCPTTGRSGNFKQFNCPSGHYNDLATLLLTTNDDAVRNIFSTNTSTEYHPLSLLIFFAVYCILGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFLESNPEPWMRNITVGELVDAKPGVITLCGIEKVARIVDVLKNTTHNGFPVVDGGVALPGRTAVGATQLHGLILRTHLVQALKKKWFLRQKRRTEDWEVREKFTWVDLAERELKIEEVAVTSDEMEMYVDLHPLTNTTPYTVVESMSVAKALVLFRQVGLRHLIVVPNYQATGVPPVVGILTRQDLMAYNILMAFPNIARPKSEGK 791
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 25654138 25657468 + Bma030717 Bma14g01376 95357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01376 791 Gene3D - 589 779 IPR046342 -
Bma14g01376 791 CDD ClC_6_like 65 587 - -
Bma14g01376 791 SUPERFAMILY CBS-domain pair 590 774 IPR046342 -
Bma14g01376 791 Pfam CBS domain 722 774 IPR000644 -
Bma14g01376 791 Pfam Voltage gated chloride channel 153 567 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bma14g01376 791 PRINTS Chloride channel signature 165 182 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bma14g01376 791 PRINTS Chloride channel signature 518 534 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bma14g01376 791 PRINTS Chloride channel signature 196 215 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bma14g01376 791 PRINTS Chloride channel signature 536 555 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bma14g01376 791 PRINTS Chloride channel signature 486 506 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bma14g01376 791 PRINTS Chloride channel signature 574 588 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bma14g01376 791 PRINTS Chloride channel signature 260 279 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bma14g01376 791 ProSiteProfiles CBS domain profile. 720 785 IPR000644 -
Bma14g01376 791 PANTHER CHLORIDE CHANNEL PROTEIN CLC-A 27 787 - -
Bma14g01376 791 SMART cbs_1 723 776 IPR000644 -
Bma14g01376 791 SMART cbs_1 609 668 IPR000644 -
Bma14g01376 791 CDD CBS_pair_voltage-gated_CLC_euk_bac 607 774 - -
Bma14g01376 791 SUPERFAMILY Clc chloride channel 74 589 IPR014743 -
Bma14g01376 791 PRINTS Plant CLC chloride channel signature 313 320 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bma14g01376 791 PRINTS Plant CLC chloride channel signature 295 305 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bma14g01376 791 PRINTS Plant CLC chloride channel signature 438 454 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bma14g01376 791 PRINTS Plant CLC chloride channel signature 281 289 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bma14g01376 791 PRINTS Plant CLC chloride channel signature 70 78 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bma14g01376 791 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 27 787 - -
Bma14g01376 791 MobiDBLite consensus disorder prediction 1 39 - -
Bma14g01376 791 Gene3D Clc chloride channel 87 588 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00031 Bma-Chr12:877510 Bma14g01376 Bma-Chr14:25654138 0 dispersed
Bma14g01376 Bma-Chr14:25654138 Bma05g00915 Bma-Chr5:47078947 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01376 K05016 - zju:107427939 1312.36