Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01394 GTTGTCCCTAATTTTTTGAGTCTTCCTCGACCTCGACCTCAATCTACGCTAGATTCAGATATGGGTGAAAATAAGCCGACTGAAATTAAAGATTTTCAGATTACAGTAGCAGATAAAGAAGAGGGGAAGAAGCAATTAGGTCCAAAAAGAAGCTCGAATAAAGACAGGCACACTAAGGTAGATGGTCGAGGAAGAAGGATACGGATGCCAGCTCTATGCGCAGCAAGAATTTTCCAATTGACAAGAGAATTAGGTCATAAATCAGATGGGGAAACCATCCAGTGGCTCTTGCAACAGGCGGAACCGTCGATAATTGCGGCTACCGGAACCGGGACTATCCCGGCTTCCGCTTTAGCCGCCGCCGGAATATCTTTTTCACAGCAAGTGACCTCTTTGTCAACTGGATTGCACCAAAAGACTGAGGATGATTTTGGGGGGTCAGGAAGTATGACCAGTTGGGCTTTGATGGGTGGCAATTTGGGGAGACCACCGTTCCATATGGGTTCAGGGCTATGGCCTCCGATCAGTGGCTTTGGGCCTAGGTCATCGTCTTCTCCGAACAGAAATTTGACGCCAGAGAGTGCAAATTATCTTCAGAAGATCGTTCCCGGGCTTGACTTGCCAGTCGGAAATATGGGTCCGATGACTTTCACCTCTATTCTGAGCGGCAATAGCCAGCATCTGCCGGAACTGGGACTCGGCCTTTCCCCAGAAGGTCACATCGGAGCTTTGAACCCACAGTCTTTGAGCCAGTTTTACCAGCAGATGAGGCAGGCTAGAGTTCAAACGCTCCATCACCAAGCTTCTCCCAAGGATGACTCTCAAGATTCAGACTCAGCCAACTAG 846 48.7 VVPNFLSLPRPRPQSTLDSDMGENKPTEIKDFQITVADKEEGKKQLGPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGISFSQQVTSLSTGLHQKTEDDFGGSGSMTSWALMGGNLGRPPFHMGSGLWPPISGFGPRSSSSPNRNLTPESANYLQKIVPGLDLPVGNMGPMTFTSILSGNSQHLPELGLGLSPEGHIGALNPQSLSQFYQQMRQARVQTLHHQASPKDDSQDSDSAN 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 26170313 26171158 + Bma012038.1 Bma14g01394 95375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01394 281 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 276 IPR005333 GO:0003700
Bma14g01394 281 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 23 276 - -
Bma14g01394 281 MobiDBLite consensus disorder prediction 23 63 - -
Bma14g01394 281 MobiDBLite consensus disorder prediction 1 63 - -
Bma14g01394 281 Pfam TCP family transcription factor 52 138 IPR017887 -
Bma14g01394 281 MobiDBLite consensus disorder prediction 261 281 - -
Bma14g01394 281 ProSiteProfiles TCP domain profile. 53 107 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00655 Bma-Chr2:18238399 Bma14g01394 Bma-Chr14:26170313 1.12E-114 dispersed
Bma13g00592 Bma-Chr13:13640844 Bma14g01394 Bma-Chr14:26170313 2.23E-161 dispersed
Bma14g01394 Bma-Chr14:26170313 Bma14g01851 Bma-Chr14:39881354 7.58E-35 dispersed
Bma14g01394 Bma-Chr14:26170313 Bma14g01410 Bma-Chr14:26659192 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58381 PF03634 TCP 2.90E-31 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01394 - - jre:108987051 393.275