Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g01426 | ATGGCTGTGACGAATAGTGCAACTAAGTCGCCGGAGGCCGAGCCAGATCGAACGGCGACCGAGGTTTTACCGATTAAGGCTTTACCCTTTAGTAATGGTGTTTTGAAGAGGCAGAATCCTCAGAGTCATCATCATCGTCACCACCTCAGCTCTGCCGTTAACTCCGCCGTCGTTTCCTACAAAGAATGTCTGAAAAACCATGCGGCTAGCTTAGGAACTCACGCTTTAGATGGGTGTGGAGAATTCATGCCTTCTCCTTCTGCAACTTCTTCCGATCCCACTTCTTTCAAATGCGCCGCCTGCGGATGTCACCGGAACTTTCACCGCCGGGAGCCCGACGACAGTTATCCAGCATTTGCCACGCATGTAATCGAGTACCAGCCACACCACCGCCACCACCCGCCGCAGCCAATTACTCGGAGTCCAAATTCTGCATCGCCTCCACCGATCTCCTCCTCCTACTACCATTCAGCTCCGCACATGCTTCTGGCTCTATCGGCAGGGCTGTCTACTCATCCGGAAAGTGCACCGGCGGCTAACCGGTGTTCAAACGGGAGGAAGCGATTCAGAACCAGATTCACTCCGGACCAAAAAGAGAAAATGCATCAGTTTGCAGAAAGTATGGGATGGAGGATGCAGAAGAGAGATGAAGAAATGGTTCAAGAGTTTTGCAATGAGATTGGTATAGATAAAGGAGTTTTGAAAGTATGGATGCACAATAACAAAAACTCATCTTCGAAGAAGGATGTTAATGGCGGAACGAATATTCCGGAACTCCACAACAGCAACATCGGCGGGCATATAAATCTCTACGATGATGATGAACGGGTACATGCCGCCATTAATGTCTTTTCTTCTTCTTCCTGA | 867 | 49.37 | MAVTNSATKSPEAEPDRTATEVLPIKALPFSNGVLKRQNPQSHHHRHHLSSAVNSAVVSYKECLKNHAASLGTHALDGCGEFMPSPSATSSDPTSFKCAACGCHRNFHRREPDDSYPAFATHVIEYQPHHRHHPPQPITRSPNSASPPPISSSYYHSAPHMLLALSAGLSTHPESAPAANRCSNGRKRFRTRFTPDQKEKMHQFAESMGWRMQKRDEEMVQEFCNEIGIDKGVLKVWMHNNKNSSSKKDVNGGTNIPELHNSNIGGHINLYDDDERVHAAINVFSSSS | 288 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 27153876 | 27154742 | + | Bma012082.1 | Bma14g01426 | 95407 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g01426 | 288 | MobiDBLite | consensus disorder prediction | 129 | 149 | - | - | |
Bma14g01426 | 288 | PANTHER | HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN | 4 | 264 | - | - | |
Bma14g01426 | 288 | CDD | homeodomain | 187 | 240 | IPR001356 | GO:0003677 | |
Bma14g01426 | 288 | Pfam | ZF-HD protein dimerisation region | 58 | 112 | IPR006456 | - | |
Bma14g01426 | 288 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 60 | 111 | IPR006456 | - | |
Bma14g01426 | 288 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bma14g01426 | 288 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 4 | 264 | - | - | |
Bma14g01426 | 288 | Gene3D | - | 172 | 248 | - | - | |
Bma14g01426 | 288 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 186 | 243 | IPR006455 | - | |
Bma14g01426 | 288 | SUPERFAMILY | Homeodomain-like | 175 | 247 | IPR009057 | - | |
Bma14g01426 | 288 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 60 | 111 | IPR006456 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00421 | Bma-Chr2:6385066 | Bma14g01426 | Bma-Chr14:27153876 | 1.33E-101 | dispersed | |
Bma12g00035 | Bma-Chr12:912067 | Bma14g01426 | Bma-Chr14:27153876 | 2.74E-43 | dispersed | |
Bma13g00147 | Bma-Chr13:1565387 | Bma14g01426 | Bma-Chr14:27153876 | 5.17E-59 | dispersed | |
Bma14g01426 | Bma-Chr14:27153876 | Bma05g00124 | Bma-Chr5:3902942 | 3.95E-43 | dispersed | |
Bma14g01426 | Bma-Chr14:27153876 | Bma06g00120 | Bma-Chr6:1632572 | 3.73E-47 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58387 | PF04770 | ZF-HD_dimer | 2.60E-28 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g01426 | - | - | jre:108984667 | 325.865 |