Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01426 ATGGCTGTGACGAATAGTGCAACTAAGTCGCCGGAGGCCGAGCCAGATCGAACGGCGACCGAGGTTTTACCGATTAAGGCTTTACCCTTTAGTAATGGTGTTTTGAAGAGGCAGAATCCTCAGAGTCATCATCATCGTCACCACCTCAGCTCTGCCGTTAACTCCGCCGTCGTTTCCTACAAAGAATGTCTGAAAAACCATGCGGCTAGCTTAGGAACTCACGCTTTAGATGGGTGTGGAGAATTCATGCCTTCTCCTTCTGCAACTTCTTCCGATCCCACTTCTTTCAAATGCGCCGCCTGCGGATGTCACCGGAACTTTCACCGCCGGGAGCCCGACGACAGTTATCCAGCATTTGCCACGCATGTAATCGAGTACCAGCCACACCACCGCCACCACCCGCCGCAGCCAATTACTCGGAGTCCAAATTCTGCATCGCCTCCACCGATCTCCTCCTCCTACTACCATTCAGCTCCGCACATGCTTCTGGCTCTATCGGCAGGGCTGTCTACTCATCCGGAAAGTGCACCGGCGGCTAACCGGTGTTCAAACGGGAGGAAGCGATTCAGAACCAGATTCACTCCGGACCAAAAAGAGAAAATGCATCAGTTTGCAGAAAGTATGGGATGGAGGATGCAGAAGAGAGATGAAGAAATGGTTCAAGAGTTTTGCAATGAGATTGGTATAGATAAAGGAGTTTTGAAAGTATGGATGCACAATAACAAAAACTCATCTTCGAAGAAGGATGTTAATGGCGGAACGAATATTCCGGAACTCCACAACAGCAACATCGGCGGGCATATAAATCTCTACGATGATGATGAACGGGTACATGCCGCCATTAATGTCTTTTCTTCTTCTTCCTGA 867 49.37 MAVTNSATKSPEAEPDRTATEVLPIKALPFSNGVLKRQNPQSHHHRHHLSSAVNSAVVSYKECLKNHAASLGTHALDGCGEFMPSPSATSSDPTSFKCAACGCHRNFHRREPDDSYPAFATHVIEYQPHHRHHPPQPITRSPNSASPPPISSSYYHSAPHMLLALSAGLSTHPESAPAANRCSNGRKRFRTRFTPDQKEKMHQFAESMGWRMQKRDEEMVQEFCNEIGIDKGVLKVWMHNNKNSSSKKDVNGGTNIPELHNSNIGGHINLYDDDERVHAAINVFSSSS 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27153876 27154742 + Bma012082.1 Bma14g01426 95407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01426 288 MobiDBLite consensus disorder prediction 129 149 - -
Bma14g01426 288 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 4 264 - -
Bma14g01426 288 CDD homeodomain 187 240 IPR001356 GO:0003677
Bma14g01426 288 Pfam ZF-HD protein dimerisation region 58 112 IPR006456 -
Bma14g01426 288 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 60 111 IPR006456 -
Bma14g01426 288 MobiDBLite consensus disorder prediction 1 21 - -
Bma14g01426 288 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 4 264 - -
Bma14g01426 288 Gene3D - 172 248 - -
Bma14g01426 288 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 186 243 IPR006455 -
Bma14g01426 288 SUPERFAMILY Homeodomain-like 175 247 IPR009057 -
Bma14g01426 288 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 60 111 IPR006456 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00421 Bma-Chr2:6385066 Bma14g01426 Bma-Chr14:27153876 1.33E-101 dispersed
Bma12g00035 Bma-Chr12:912067 Bma14g01426 Bma-Chr14:27153876 2.74E-43 dispersed
Bma13g00147 Bma-Chr13:1565387 Bma14g01426 Bma-Chr14:27153876 5.17E-59 dispersed
Bma14g01426 Bma-Chr14:27153876 Bma05g00124 Bma-Chr5:3902942 3.95E-43 dispersed
Bma14g01426 Bma-Chr14:27153876 Bma06g00120 Bma-Chr6:1632572 3.73E-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58387 PF04770 ZF-HD_dimer 2.60E-28 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01426 - - jre:108984667 325.865