Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01434 ATGTCCATCTTGCCTCCACGAGCCTACGGTTCTGCGTCTTCTTCCTCTGCTCCCTCTCCAAACCCTCCTTCCCAGCATGGCCAACATCCTGTTCTTCTCTCCTCTTCTCCTCCCTCCTCCTCTCCTATTTCTCAGTGTGACCGGTCCTTCCAGTTGCTTCGGATCTCTGATTCTGAGTCTTCCCCCTTAGACTCCTGCGGCGATTCGGGTGCAACAAGTAAAGCTGCAGAAGATTTCGTTGGACCTTCTGAAAAGGTGACACAGCACAAGAAATCAGTCCGTCAGAAGACTTTGCCCCATGAAAGGGCAATCACTCATACCCAAGATTCCTCGGGTGGAGTGGGGATAAGATCAGCCAATTCTAAAGGAAAAAGGACTGCATCCACTGAGTCTCCTTTAGGTCAACAAAACAATGGGTCTGTTAGTTCACTTGGCCATGGGCCAAATTCAACTGGACGAAAAGCCCAGGTAATGAATGCTAATCATTTGCTGAACTTCCATTATGATACCATTTCACGTCCTCAACCAAGAGCTCCTCCTCCAAGAAGGCAGAAATTAAAGCCATACAACAAAGCTCTATTTCTTCAGGCTAATTATAAATTTGTGGTATTAGACTCTGGTAATTATTCACCTGAGTCTTTGGATCCAGATAAAATGTTGCATTGGGATGAGATTATATGTGTGAGGTACTCAACACCAACTGTCATTCGGTGTCCTATTTGTTTGGAATATCCCCTATGTCCTCAAATTACCACATGTGGGCATATTTTTTGTTTCCCATGTATTCTACGTCACTTGTTAATGGGAGAAGAGGATCATAAAGGTGACTGTTGGAAAAAGTGTCCCTTGTGTTTTGTTATGATATCTCCAAAAGATTTATATACCGTATACATTGAGATTGTTGAACGGTTTTCTGTTGGTGATAGTATATCATTCACGCTTTTGAACCGGCAAAAAGATTCATTCGTTGTATCACATAAGCATGAACAAGACAATAAAGGCATACCATTTGATGTTAGCGATGAAATTTACGATCGCTTTTCAAAGTTCACATTTACATTGGATGTGAATCTCTCAGTCAGAAAAGCAAAGTCAGATCTAGAAGGATGGTTGGTCAGAGCAGAAGCAGGTCTTGTTGATGACCTAGAGAAGCTTCCATATGTTTGTGCTGTAATTGAGCAACTAGATCAGAGGAAAATGCATTTGAATGAGCATCTGGCTTCTGTGAAGAGTCAGTCCTGTCAAAATATTGACTCTCAGGGAGAAACTCATTCAGTTAAGTCCAATGCTGATGTTGATAGCTCTGGTTGTGGAACATCTTGTTTTGGAGATGCATTTTTGGCTTCAGAATTCAATGAACAAAGCACGAGGTATAATAATGCAATCACTTTGAATGGTACTTCTTTGGAGCAAACGATGGATATGGGTGAATCATTAGAAGGTCAAGAAGTTGTTTTATCTTCTTCATACGAGGAAGATAGTATTGTTCATGGGATCTCAAATCAATGTAGATCAGTAGAAAAGAAAGAGTCATACAATTTCTACCAGGCGGCCGATGGGCAATACATCATTCTTCATCCACTAAATGTTAAGTGTCTTCTACACCATTATGGAAGCTACGCCATGCTTCCAGACAGGATAAGTGGAAGAATATTACAGTTGGAGACAGTGACTCAGTCGGAAGCCACTAGGAGGCGCTATCGCTATCTAAGTCATTTTTCTTTGACAACTACCTTCCAGCTTTGCGAAGTTGATTTGAGTGAATTATTGCCTCCTGCGTCTCTCATTCCTTTTATGGACGAAATCAAGGAGGCGTGA 1818 41.8 MSILPPRAYGSASSSSAPSPNPPSQHGQHPVLLSSSPPSSSPISQCDRSFQLLRISDSESSPLDSCGDSGATSKAAEDFVGPSEKVTQHKKSVRQKTLPHERAITHTQDSSGGVGIRSANSKGKRTASTESPLGQQNNGSVSSLGHGPNSTGRKAQVMNANHLLNFHYDTISRPQPRAPPPRRQKLKPYNKALFLQANYKFVVLDSGNYSPESLDPDKMLHWDEIICVRYSTPTVIRCPICLEYPLCPQITTCGHIFCFPCILRHLLMGEEDHKGDCWKKCPLCFVMISPKDLYTVYIEIVERFSVGDSISFTLLNRQKDSFVVSHKHEQDNKGIPFDVSDEIYDRFSKFTFTLDVNLSVRKAKSDLEGWLVRAEAGLVDDLEKLPYVCAVIEQLDQRKMHLNEHLASVKSQSCQNIDSQGETHSVKSNADVDSSGCGTSCFGDAFLASEFNEQSTRYNNAITLNGTSLEQTMDMGESLEGQEVVLSSSYEEDSIVHGISNQCRSVEKKESYNFYQAADGQYIILHPLNVKCLLHHYGSYAMLPDRISGRILQLETVTQSEATRRRYRYLSHFSLTTTFQLCEVDLSELLPPASLIPFMDEIKEA 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27399667 27404357 + Bma012092.2 Bma14g01434 95415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01434 605 SMART ring_2 238 284 IPR001841 -
Bma14g01434 605 MobiDBLite consensus disorder prediction 7 68 - -
Bma14g01434 605 MobiDBLite consensus disorder prediction 1 154 - -
Bma14g01434 605 CDD RING-HC_RNF10 238 285 - -
Bma14g01434 605 Pfam Zinc finger, C3HC4 type (RING finger) 238 284 IPR018957 GO:0046872
Bma14g01434 605 Coils Coil 392 412 - -
Bma14g01434 605 ProSitePatterns Zinc finger RING-type signature. 253 262 IPR017907 -
Bma14g01434 605 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 312 IPR013083 -
Bma14g01434 605 SUPERFAMILY RING/U-box 233 298 - -
Bma14g01434 605 MobiDBLite consensus disorder prediction 104 154 - -
Bma14g01434 605 ProSiteProfiles Zinc finger RING-type profile. 238 284 IPR001841 -
Bma14g01434 605 PANTHER RING FINGER 10 FAMILY MEMBER 106 603 IPR039739 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01434 Bma-Chr14:27399667 Bma03g01075 Bma-Chr3:13125784 5.51E-07 dispersed
Bma14g01434 Bma-Chr14:27399667 Bma02g01375 Bma-Chr2:56115689 7.47E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01434 - - vvi:100248015 664.455