Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01442 GATAGCAACAGGGACGATGATACGGTGTCCGGCCCCACAGAATGCTACGCCTGCACACAGGTTGGCGTTCCCGCGTTTCACTCCACCAGCTGTGACCGAGCGAACCAGCCGGAATGGGAGGCCTCCGCCGGGTCCTCCCTCGTACCCATCAAAAACAAGAACGAGCAGAGTCGAGAGACAAGAACCCAGAGACCATCCGGATTTTTCGGACCGTTACGGGACCCGAGAAGTAAGCAGGTCCGGAGATGGAACAGAGCGATCTTATTGGCTCGTGGCATGGCCTTAGCCGTCGATCCACTCTTCTTCTACGCGCTGTCGATCGGACGAGGAGGAACTCCGTGCCTGTTCATGGACGGCGGATTAGCCGCAATCGTGACCGTAATTCGCACGTGTGTGGACGTCCTCCATCTCTGCCACGTGTGGTTCCAGTTCCGGACGGCGTACGTGTCGAGGGAGTCTCTAGTAGTAGGCTGCGGGAAACTCGTGTGGGACGCACGCGCCGTCGCTCTGCACTACCTCCGGTCGTTCAAAGGCTTCTGGTTCGACGCCTTTGTCATAATCCCAGTTCCACAGGCAGTGTTCTGGCTGGTATTGCCCAAATTGATTAGGGAAGAGAGGATAAAGGTGATAATGACGGTGCTGTTGATGATTTTCATGTTCCAATTTCTACCCAAGGTTTACCACTGCATCTACACGATGAGGAGGATGCAGAAGGTGACTGGCTACATCTTTGGTACCATTTGGTGGGGTTTTGGTCTCAATCTCATTGCATATTTCATTGCTTCTCATGTTGCAGGTGGTTGCTGGTACGTCCTGGCGATACAGCGAGTGGCTTCGTGTCTGCAGCAGCACTGCCGCAGACATGGCTGCAATCTCTCCTTGTCTTGCTCCGAGGAGATTTGTTATCAATCTCTTCTACCTGCAAATTCCGTTGGCAATTTTTGCGGCGGAAATTCGACGGCGACTGCTATCAGAAAGCCTTTATGCTTGGACGAGCATGGATCCTTCCGCTACGGCATATATCAGTGGGCTCTTCCTGTTATTTCCAGTAATTCTGTTGTTGTTAAGGTGCTTTATCCCATATTTTGGGGCTTAATGACTCTCAGCACCTTTGGTAATGATCTAGAGCCTACAAGTAATTGGCTGGAAGTGATATTCAGTATTTGCCTTGTGTTGAGTGGACTAATGTTGTTCACTCTGTTGATCGGGAATATCCAGGTATTTTTGCACGCTGTGATGGCGAAAAAGAGAAAAATGCAGCTGAGAAGTCGAGACATGGAATGGTGGATGCGAAGAAGACAGTTGCCGTTTCGTTTAAGACAAAGGGTTCGCCATTACGAACACCAAAGATGGACGGTTCTAGGAGGAGAAGATGAGATGTCTCTGATCAAGGACTTACCCGACGGCCTTCGTCGAGACATTAAACGATTTCTTTGCTTGGACCTCATCAAACATGTACCCCTATTCCATGACATGGACGAACTGATTCTCGATAACATCTGTGATAGGGTTACCCCACTCGTCTTCTCCAAAGATGAAAGAGAAGGAGATCCAGTGGCAAGAATGCTATTCATCATTCGTGGGCGAATCAAGCGCTGCCAAAGCCTCAGCAAGGGAGTGATAGCCACAAGCATGCTTGACCAGGGAGGATTCTTTGGCGACGAACTCTTATCCTGGTGCCTCCGTCGCCCTTTCATGGATCGGCTTCCAGCCTCATCAGCAACCTTTGTGTGTGTCGAATCAACAGAAGCATTTGGCCTCGATGCAGCCCATCTTCGATTCATCACTGACCATTTTCGCTATAAGTTTGCCAACGAGAGGCTGAAAAGAACAGCAAGATACTACTCTTCCAATTGGAGAACATGGGCTGCGGTGATTATACAATTTGCATATCGTCGTCACAAGTCAAAAATTCAAGGTCCGGTGATAATTGTGCCCGAGATTGAAGATTCCGACCGTCGGCTTTTGCAGTATGCTGCCATGTTCATGTCAATTAGGCCACATGACCATCTTGAATAA 2019 49.73 DSNRDDDTVSGPTECYACTQVGVPAFHSTSCDRANQPEWEASAGSSLVPIKNKNEQSRETRTQRPSGFFGPLRDPRSKQVRRWNRAILLARGMALAVDPLFFYALSIGRGGTPCLFMDGGLAAIVTVIRTCVDVLHLCHVWFQFRTAYVSRESLVVGCGKLVWDARAVALHYLRSFKGFWFDAFVIIPVPQAVFWLVLPKLIREERIKVIMTVLLMIFMFQFLPKVYHCIYTMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLQQHCRRHGCNLSLSCSEEICYQSLLPANSVGNFCGGNSTATAIRKPLCLDEHGSFRYGIYQWALPVISSNSVVVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICLVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRSRDMEWWMRRRQLPFRLRQRVRHYEHQRWTVLGGEDEMSLIKDLPDGLRRDIKRFLCLDLIKHVPLFHDMDELILDNICDRVTPLVFSKDEREGDPVARMLFIIRGRIKRCQSLSKGVIATSMLDQGGFFGDELLSWCLRRPFMDRLPASSATFVCVESTEAFGLDAAHLRFITDHFRYKFANERLKRTARYYSSNWRTWAAVIIQFAYRRHKSKIQGPVIIVPEIEDSDRRLLQYAAMFMSIRPHDHLE 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27763955 27774259 + Bma012100.1 Bma14g01442 95423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01442 672 MobiDBLite consensus disorder prediction 40 71 - -
Bma14g01442 672 Gene3D - 114 411 - -
Bma14g01442 672 ProSiteProfiles cAMP/cGMP binding motif profile. 514 564 IPR000595 -
Bma14g01442 672 SUPERFAMILY Voltage-gated potassium channels 75 409 - -
Bma14g01442 672 SUPERFAMILY cAMP-binding domain-like 415 599 IPR018490 -
Bma14g01442 672 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 19 672 - -
Bma14g01442 672 Pfam Ion transport protein 83 406 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bma14g01442 672 CDD CAP_ED 488 595 IPR000595 -
Bma14g01442 672 Gene3D Helix hairpin bin 414 479 - -
Bma14g01442 672 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 19 672 - -
Bma14g01442 672 Gene3D Jelly Rolls 486 601 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00518 Bma-Chr10:6008200 Bma14g01442 Bma-Chr14:27763955 0 dispersed
Bma14g01442 Bma-Chr14:27763955 Bma14g01461 Bma-Chr14:28213055 0 dispersed
Bma14g01442 Bma-Chr14:27763955 Bma08g00382 Bma-Chr8:8627202 1.70E-120 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01442 K05391 - jre:108987412 1123.23