Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01450 ATGAGCGGGGTATTTGAAGAATACGAACGCCAATATTGTGAGCTTTCTGTCAATCTTTCGAGCAAATGCTCCACCGCTGATGCCCTTGATCGAGAGAATAGGAAGCAAAAAGTTTCTGAACTCAAGGCTGGAATTGATGAAGCAGAATCTTTGATTCGGAAAATGGATCTCGAGGCAAGAAGTTTGCAGCCAAACGTCAAGGTTGTTCTTCTCGCCAAGTTAAGGGAGTACAAGTCAGACTTGAATAATTTGAAAGGGGAAATCAAGCGAATTGCTTCAGCTGACTCAATATCATTTGCCAAAGAAGACTTGCTAGAATCAGGAATGGCGGATAGACTGACAGCATCAGCTGATCAAAAAACAAGATTAATGATGTCAACAGAGAGGTTGAACCAATCTCTGCATGGAGTCGATGACAATATTGGGAAAAGCAGGAGAGTTTTAACCACCATATCGAGGAGGATGAATAGGAATAAATGGATAGTAGGCTCCATATTTGTTCTCCTTATGATTGCTATCATCTTAATTGTCTACTTTAAACTCTCTAAGTAG 552 40.58 MSGVFEEYERQYCELSVNLSSKCSTADALDRENRKQKVSELKAGIDEAESLIRKMDLEARSLQPNVKVVLLAKLREYKSDLNNLKGEIKRIASADSISFAKEDLLESGMADRLTASADQKTRLMMSTERLNQSLHGVDDNIGKSRRVLTTISRRMNRNKWIVGSIFVLLMIAIILIVYFKLSK 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27923396 27924980 + Bma012108.2 Bma14g01450 95431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01450 183 SUPERFAMILY t-snare proteins 6 92 IPR010989 GO:0016020|GO:0016192
Bma14g01450 183 Gene3D - 1 98 IPR038407 -
Bma14g01450 183 PANTHER VESICLE TRANSPORT V-SNARE 13-LIKE 1 133 - -
Bma14g01450 183 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 133 - -
Bma14g01450 183 PANTHER VESICLE TRANSPORT V-SNARE 13-LIKE 132 182 - -
Bma14g01450 183 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 132 182 - -
Bma14g01450 183 Coils Coil 38 58 - -
Bma14g01450 183 Coils Coil 67 94 - -
Bma14g01450 183 Pfam Vesicle transport v-SNARE protein N-terminus 12 90 IPR007705 GO:0006886|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g00431 Bma14g01450 CCT
Bma01g01053 Bma14g01450 CCT
Bma02g00431 Bma14g01450 ECH
Bma01g01053 Bma14g01450 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00283 Bma-Chr3:2101564 Bma14g01450 Bma-Chr14:27923396 2.19E-62 dispersed
Bma14g01450 Bma-Chr14:27923396 Bma01g01053 Bma-Chr1:11050491 2.46E-44 dispersed
Bma14g01450 Bma-Chr14:27923396 Bma02g00431 Bma-Chr2:6501342 1.83E-55 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01450 K08493 - csin:114296522 254.988