Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01458 ATGCTGACAGATATCTCTATATATTTCTCTTCAAAAGCCAACCCTCTTCATTTCCTCAAACAACGCATCTACTCCGATCTCTTCACTGAACTCTACTGCAGAGAAATGGCTTATTTGGAAATCCTTCTGGTGGGATTCTCTCTCTTAGTGTGTTCTGTTAATGGGTATTATGGAGGTTGGATGAACGCCCATGCAACTTTCTATGGCGGAAGTGATGCATCTGGGACGATGGGTGGAGCTTGTGGATATGGAAACCTTTACAGCCAAGGCTATGGGACAAAGACTGCAGCACTGAGCACTGCGCTGTTCAACAATGGTTTAAGCTGTGGAGCCTGCTATGAATTAAGATGCGTAAATGACCCACAATGGTGTCTTCCAGGATCGATTGTGGTCACTGCAACTAATTTCTGCCCTCCAGGAGGCTGGTGTGACCCTCCTCGTGAACATTTTGACCTCTCTCAGCCTATATTTCAACGCATTGCTCAGTACAGGGCTGGAATTGTGCCTGTTTCTTACAGAAGGATAAGATGCAGAAGAGGTGGAGGCATTAGATTCACAATCAATGGCCATTCTTACTTCAACTTGGTACTGATAACCAACGTGGGTGGAGCTGGAGACGTCCATGCTGTAGCCATTAAAGGGTCAAAAACTAGGTGGCAACAAATGTCAAGAAATTGGGGTCAGAACTGGCAGAGCAACTCTTACTTAAATGGACAAAGCCTCTCTTTTGCAGTCACAGGCAGTGATGGTCGAATTGTAGTTTCTTACAACGTGGCTCCTTCCAGTTGGTCCTTCGGACAAACATATTCTGGTTCACAGTTCAGATATTAA 831 45.13 MLTDISIYFSSKANPLHFLKQRIYSDLFTELYCREMAYLEILLVGFSLLVCSVNGYYGGWMNAHATFYGGSDASGTMGGACGYGNLYSQGYGTKTAALSTALFNNGLSCGACYELRCVNDPQWCLPGSIVVTATNFCPPGGWCDPPREHFDLSQPIFQRIAQYRAGIVPVSYRRIRCRRGGGIRFTINGHSYFNLVLITNVGGAGDVHAVAIKGSKTRWQQMSRNWGQNWQSNSYLNGQSLSFAVTGSDGRIVVSYNVAPSSWSFGQTYSGSQFRY 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28081838 28083173 + Bma012117.1 Bma14g01458 95439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01458 276 SUPERFAMILY PHL pollen allergen 180 270 IPR036749 -
Bma14g01458 276 PRINTS Expansin/Lol pI family signature 77 95 IPR007118 GO:0005576
Bma14g01458 276 PRINTS Expansin/Lol pI family signature 219 233 IPR007118 GO:0005576
Bma14g01458 276 PRINTS Expansin/Lol pI family signature 99 117 IPR007118 GO:0005576
Bma14g01458 276 PRINTS Expansin/Lol pI family signature 165 181 IPR007118 GO:0005576
Bma14g01458 276 PRINTS Expansin/Lol pI family signature 257 271 IPR007118 GO:0005576
Bma14g01458 276 PRINTS Expansin/Lol pI family signature 59 74 IPR007118 GO:0005576
Bma14g01458 276 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 192 271 IPR007117 -
Bma14g01458 276 Pfam Lytic transglycolase 95 172 IPR009009 -
Bma14g01458 276 Gene3D - 49 178 IPR036908 -
Bma14g01458 276 Gene3D - 180 274 IPR036749 -
Bma14g01458 276 Pfam Expansin C-terminal domain 183 260 IPR007117 -
Bma14g01458 276 PANTHER EXPANSIN-A5 44 275 - -
Bma14g01458 276 PANTHER EXPANSIN-A15 44 275 IPR002963 GO:0009664
Bma14g01458 276 PRINTS Expansin signature 157 170 IPR002963 GO:0009664
Bma14g01458 276 PRINTS Expansin signature 117 128 IPR002963 GO:0009664
Bma14g01458 276 PRINTS Expansin signature 228 249 IPR002963 GO:0009664
Bma14g01458 276 PRINTS Expansin signature 140 157 IPR002963 GO:0009664
Bma14g01458 276 PRINTS Expansin signature 181 193 IPR002963 GO:0009664
Bma14g01458 276 PRINTS Expansin signature 193 214 IPR002963 GO:0009664
Bma14g01458 276 PRINTS Expansin signature 129 139 IPR002963 GO:0009664
Bma14g01458 276 PRINTS Expansin signature 257 273 IPR002963 GO:0009664
Bma14g01458 276 PRINTS Expansin signature 90 104 IPR002963 GO:0009664
Bma14g01458 276 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 78 182 IPR007112 -
Bma14g01458 276 SUPERFAMILY Barwin-like endoglucanases 59 200 IPR036908 -
Bma14g01458 276 SMART dpbb_1 95 172 IPR007112 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma13g00150 Bma14g01458 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01458 Bma-Chr14:28081838 Bma15g00149 Bma-Chr15:1543263 5.48E-139 dispersed
Bma13g00150 Bma-Chr13:1581215 Bma14g01458 Bma-Chr14:28081838 1.12E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01458 - K20628 pxb:103964991 446.432