Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01461 ATGACTCTCAGCACCTTTGGTAATGATCTAGAGCCTACAAGTAATTGGCTGGAAGTGATATTCAGTATTTGCCTTGTGTTGAGTGGACTAATGTTGTTCACTCTGTTGATCGGGAATATCCAGGTATTTTTGCACGCTGTGATGGCGAAAAAGAGAAAAATGCAGCTGAGAAGTCGAGACATGGAATGGTGGATGCGAAGAAGACAGTTGCCGTTTCGTTTAAGACAAAGGGTTCGCCATTACGAACACCAAAGATGGACGGTTCTAGGAGGAGAAGATGAGATGTCTCTGATCAAGGACTTACCCGACGGCCTTCGTCGAGACATTAAACGATTTCTTTGCTTGGACCTCATCAAACATGTACCCCTATTCCATGACATGGACGAACTGATTCTCGATAACATCTGTGATAGGGTTACCCCACTCGTCTTCTCCAAAGATGAAAAGATTATAAGAGAAGGAGATCCAGTGGCAAGAATGCTATTCATCATTCGTGGGCGAATCAAGCGCTGCCAAAGCCTCAGCAAGGGAGTGATAGCCACAAGCATGCTTGACCAGGGAGGATTCTTTGGCGACGAACTCTTATCCTGGTGCCTCCGTCGCCCTTTCATGGATCGGCTTCCAGCCTCATCAGCAACCTTTGTGTGTGTCGAATCAACAGAAGCATTTGGCCTCGATGCAGCCCATCTTCGATTCATCACTGACCATTTTCGCTATAAGTTTGCCAACGAGAGGCTGAAAAGAACAGCAAGATACTACTCTTCCAATTGGAGAACATGGGCTGCGGTGATTATACAATTTGCATATCGTCGTCACAAGCCGGTGATAATTGTGCCCGAGATTGAAGATTCCGACCGTCGGCTTTTGCAGTATGCTGCCATGTTCATGTCAATTAGGCCACATGACCATCTTGAATAA 918 46.08 MTLSTFGNDLEPTSNWLEVIFSICLVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRSRDMEWWMRRRQLPFRLRQRVRHYEHQRWTVLGGEDEMSLIKDLPDGLRRDIKRFLCLDLIKHVPLFHDMDELILDNICDRVTPLVFSKDEKIIREGDPVARMLFIIRGRIKRCQSLSKGVIATSMLDQGGFFGDELLSWCLRRPFMDRLPASSATFVCVESTEAFGLDAAHLRFITDHFRYKFANERLKRTARYYSSNWRTWAAVIIQFAYRRHKPVIIVPEIEDSDRRLLQYAAMFMSIRPHDHLE 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28213055 28214587 - Bma012122.1 Bma14g01461 95442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01461 305 Gene3D Helix hairpin bin 49 114 - -
Bma14g01461 305 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 305 - -
Bma14g01461 305 SMART cnmp_10 123 249 IPR000595 -
Bma14g01461 305 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2 1 305 - -
Bma14g01461 305 ProSiteProfiles cAMP/cGMP binding motif profile. 123 202 IPR000595 -
Bma14g01461 305 Gene3D Jelly Rolls 121 239 IPR014710 -
Bma14g01461 305 SUPERFAMILY cAMP-binding domain-like 50 237 IPR018490 -
Bma14g01461 305 CDD CAP_ED 123 233 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01442 Bma-Chr14:27763955 Bma14g01461 Bma-Chr14:28213055 0 dispersed
Bma14g01461 Bma-Chr14:28213055 Bma11g00643 Bma-Chr11:11110782 8.55E-74 dispersed
Bma14g01461 Bma-Chr14:28213055 Bma08g00382 Bma-Chr8:8627202 2.26E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01461 K05391 - pop:18107312 528.094