Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01476 ATGGGATCCTGTAATGGTTATTACTCAGCTGGAGAGTTTGATTTTGATACCAAATGGCTGATTGATCCAAAGCATCTTTTTGTTGGCCCTAAAATTGGGGAGGGTGCGCATGCTAAAGTGTACGAGGGAAAATACAAAAACCAAAATGTTGCTGTCAAGGTAGTTCACAAAGGAGAAACTCCGGAAGAAATTTCCAAAAGGGAAGCAAGGTTTGCGAGAGAAATATCAATGTTATCCAGAGTTCAGCACAAGAATCTAGTGAAGTTTATAGGTGCTTGCAAGGAACCGGTCATGGTGATAGTGACAGAGCTTCTGTTGGGAGGTACACTGAGGAAATACTTGCTGAATATGAGGCCCAGGTGCTTGGAAATGCCCGTGGCAGTTGGCTTTGCTCTTGATATTGCCCGTGGAATGGAATGCTTACACTCCCATGGAATTATTCATCGTGACTTGAAACCTGAGAACTTAATCTTGACTGCAGATCATACAACTGTTAAACTGGCCGATTTTGGGCTTGCTAGGGAAGAGTCAGTTACTGAGATGATGACAGCTGAGACAGGAACATACCGGTGGATGGCTCCCGAGCTTTACAGCACAGTCACTTTAAGGCATGGAGAGAAGAAGCATTACAACCACAAGGTGGATGTATATAGCTTTGCAATTGTATTGTGGGAGCTCATCCATAATAAATTACCCTTTGAAGGCATGTCAAATCTACAAGCAGCATACGCAGCTGCTTTTAAGAATACAAGACCAAATGCCGAAAACCTTCCTGAGGATTTGGCATCCATCGTGACTTCATGTTGGAAAGAGGATCCGAATTCCCGCCCTAATTTCAGCCAAATCATACAGAAGCTTCTGCACTATTTCTCAAGCATTTCACCTCCAGAGCCTGTCATTGCACCACGGCTGCGGACATCGGAAAATGCCGTGCTCCCACCAGAGTCTCCGGGAACAAGTTCTCTCATGGCTGCAAGAGATGACTCAGCAGACGCAGCAAGTGGCAAAGTGGAAGTAAAACATGCTCTAACTCAAGTGCACAATGGGGCATTGGAGACTTGTAGAATCAATCAGCCCAGTGTTGAGCTCCTTCTAATGGCTTATATCTTACTATTTCCTTTTTTATATCATAATTTTTTGAAGACGCTCTCAATCTCCTCCCTTCTCCAGTCTCCTCTTTCATCCAAGTATGCCCTCTCTCTCTCTCTTTCTGTATCCCCTAGAGTTTGTCTTTTCGTTTCCCCTTCGTTTGTTGTCGAGACATCCGGAGACCTAGTTTTGAATGTAATCGTGTTGAGAGATCTTCTTCCAAAGGGTGGCTCAAGCACTGCAGCTCGACCAAGCACTTCAAATAATGATGGCGTGTGTTATACAAGTAATATTGTTAACCCTTTCAAACAGTGGTTGCGTTCCTTGTCCATGTCGAAAGGAAGGAGTATGCGAAGCAAGGTCGAACGACGGATGAGAAAAGAATCGGGAAAAACTCTACGGGAGATTCGAAGAGCTAAAAAGATAAAGAAGAAGCTGATGACAGATGAAGAGAGGCTAATTTACAATCTCAAAAGGGCCAAAAAGAAAGTAGCTTTACTCTTACAAAAACTTAAAAAATATGAGCTACCAGAGTTGCCTCCCCCTTGTCATGATCCTGAGCTACTGACTGCTGAACAGCTTCAGGCATATAAGAAGATTGGATTTAAAAATAAAAATTACGTTCCTGTTGGTGTCCGTGGAGTATTTGGAGGCGTTGTACAAAATATGCATCTACATTGGAAGTTTCACGAGACCGTACAAGTTTGTTGCGATAACTTCCCTAAAGAAAAGATCAAGGAGATGGCCACCATGCTTGCCAGACTTAGTGGCGGTATTGTGGTAAATATTCATAACACAAAAACAATAATCATGTTTCGTGGCAGGAACTACCGCCAACCAAAAAATCTGATACCTATCAACACTCTCACTAAAAGAAAGGCATTATTCAAGGCCAGATTTGAACAGGCATTAGATTCACAGAAACTAAATATAAAGAAAATGGAACAGGAGCTCCGTCGAAAAGGAGTAAATCCAGAGGATCCACTTGCAATTGCAAGCATACAGAGAGTAGCTTCTACGTTCTTCAATGCTATCGACAAGAAGGAAGGAACGCCATATGTTTTCCATGGGGATAATGAGGTTTTAAAGGAGGCTACTAATCTGGAGCATTCCGAAGCTAATGATGACAGTGATCAGGAAGAATTAGACAGATTTATAGCTGAAATAGAGGATGCAGCCGATAGAGAATGGGCCGCTGAGGAAGTGGCTGAGAAAGAAGAGCTTAGCAAAATTAGGTACTGGAACAGAGAAGAATACGGCGGAAGATTCAGAAAATCTGGAATGCATAGAGACGAGAATTTTGCTGACGAAGTCGAAGGTGGGAGAAGTTGGAATGATAGACCCGGTAGGCATAGGACTGATAACATTGGAGATGTAGGTAAAGATTCTCTTGAAGGGGAAGATGAATGGGATTCTGATGAAGTTGAAGATGCAAGCGATAGTGATGGTGGTGATTTTGAAGACAATCGTGATTCGATCAATCGGCCGAGAAGAGCCAAGATGATGACCGACCGGACCAGGAAAAGCGAAGGTTTTGAGAGAAGATCTGAAAATAGTTTCAGGAAAAACATGCCTGAAGAAGGTTCTGAATCAGAAAATATGTTTAGTGATCTTGAGAGTGCAATGTGGCAATCTGATGAAGAGGACGAAGATGAACCGAATGTAACAAAAATAGTTGGTCAAAATAAACAAAAAACCTTGAATAAGGGCGAGAGTGATGACGAATATGATGGAACCTACGACAAGTTTCGCAACTACAGAATTACAAACAAAAAACAGGAGGGAATCTTCAAAGCCAAAAGGAATAATGATTTGAAGAGAAATGTCGGAGAAACTGCAGAGAGCTCAAAGGATGAGTTCAGTGATATAGAAAATGTGGTATGGGGATCGGATGGTGAGGAGAAAAGTGCTCTCAAGGCCGGCAATATAGACAGAGAAGAGAAATATCATATGAAAAAAACTCGGCTTGACAATGTGCGGATGAAAACACCAGCGGAGATGGATGAGAACTGGGACAGTGATTAG 3114 42.49 MGSCNGYYSAGEFDFDTKWLIDPKHLFVGPKIGEGAHAKVYEGKYKNQNVAVKVVHKGETPEEISKREARFAREISMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLEMPVAVGFALDIARGMECLHSHGIIHRDLKPENLILTADHTTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDVYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNTRPNAENLPEDLASIVTSCWKEDPNSRPNFSQIIQKLLHYFSSISPPEPVIAPRLRTSENAVLPPESPGTSSLMAARDDSADAASGKVEVKHALTQVHNGALETCRINQPSVELLLMAYILLFPFLYHNFLKTLSISSLLQSPLSSKYALSLSLSVSPRVCLFVSPSFVVETSGDLVLNVIVLRDLLPKGGSSTAARPSTSNNDGVCYTSNIVNPFKQWLRSLSMSKGRSMRSKVERRMRKESGKTLREIRRAKKIKKKLMTDEERLIYNLKRAKKKVALLLQKLKKYELPELPPPCHDPELLTAEQLQAYKKIGFKNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHNTKTIIMFRGRNYRQPKNLIPINTLTKRKALFKARFEQALDSQKLNIKKMEQELRRKGVNPEDPLAIASIQRVASTFFNAIDKKEGTPYVFHGDNEVLKEATNLEHSEANDDSDQEELDRFIAEIEDAADREWAAEEVAEKEELSKIRYWNREEYGGRFRKSGMHRDENFADEVEGGRSWNDRPGRHRTDNIGDVGKDSLEGEDEWDSDEVEDASDSDGGDFEDNRDSINRPRRAKMMTDRTRKSEGFERRSENSFRKNMPEEGSESENMFSDLESAMWQSDEEDEDEPNVTKIVGQNKQKTLNKGESDDEYDGTYDKFRNYRITNKKQEGIFKAKRNNDLKRNVGETAESSKDEFSDIENVVWGSDGEEKSALKAGNIDREEKYHMKKTRLDNVRMKTPAEMDENWDSD 1037
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 29907285 29915254 - Bma012144.1 Bma14g01476 95457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01476 1037 Gene3D Transferase(Phosphotransferase) domain 1 107 296 - -
Bma14g01476 1037 Gene3D - 551 647 IPR035920 -
Bma14g01476 1037 SUPERFAMILY YhbY-like 551 645 IPR035920 -
Bma14g01476 1037 SUPERFAMILY Protein kinase-like (PK-like) 18 307 IPR011009 -
Bma14g01476 1037 SMART CRS1_YhbY_2 552 636 IPR001890 GO:0003723
Bma14g01476 1037 Coils Coil 660 687 - -
Bma14g01476 1037 ProSiteProfiles CRM domain profile. 550 647 IPR001890 GO:0003723
Bma14g01476 1037 CDD STKc_MAP3K-like 32 286 - -
Bma14g01476 1037 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 427 1037 IPR040286 -
Bma14g01476 1037 MobiDBLite consensus disorder prediction 827 847 - -
Bma14g01476 1037 PANTHER RNA-BINDING CRS1 / YHBY (CRM) DOMAIN PROTEIN 427 1037 - -
Bma14g01476 1037 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Bma14g01476 1037 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Bma14g01476 1037 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Bma14g01476 1037 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Bma14g01476 1037 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Bma14g01476 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Bma14g01476 1037 MobiDBLite consensus disorder prediction 848 891 - -
Bma14g01476 1037 Pfam CRS1 / YhbY (CRM) domain 552 636 IPR001890 GO:0003723
Bma14g01476 1037 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g01476 1037 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Bma14g01476 1037 MobiDBLite consensus disorder prediction 801 826 - -
Bma14g01476 1037 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
Bma14g01476 1037 ProSiteProfiles Protein kinase domain profile. 26 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g01476 1037 MobiDBLite consensus disorder prediction 801 896 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00392 Bma-Chr5:12261270 Bma14g01476 Bma-Chr14:29907285 5.37E-36 dispersed
Bma10g00355 Bma-Chr10:3339143 Bma14g01476 Bma-Chr14:29907285 1.32E-144 dispersed
Bma11g00583 Bma-Chr11:8645291 Bma14g01476 Bma-Chr14:29907285 1.86E-17 dispersed
Bma14g01476 Bma-Chr14:29907285 Bma11g00795 Bma-Chr11:23180689 2.27E-69 dispersed
Bma14g01476 Bma-Chr14:29907285 Bma07g00631 Bma-Chr7:10046470 8.48E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66905 PF07714 PK_Tyr_Ser-Thr 1.60E-59 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01476 - - qsu:112027574 620.542