Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01484 GAGATGGCTTCTTCTTCAAACTATTCGAATTCTCCGTGTGCTGCCTGCAAGTTCTTGAGGAGAAAATGCTTGCCAAATTGCATTTTCGCCCCATATTTCCCTCCTGAAGAGCCACAGAAATTTGTGAATGTTCACAAGATATTTGGAGCAAGTAATGTGAGTAAGCTTCTGAATGAAGTCCTACCTCATCAGAGAGAAGATGCAGTAAATTCTCTTGCGTATGAAGCAGAAGCAAGAATCAAAGATCCAGTCTATGGCTGCGTTGGAGCCATTTCAATCCTGCAAAAGCAAGTTCTTCGCCTGAAGAAAGAGTTAGACGCCACAAATGCAGATCTGATAAGGTATGCCTATAATGAATTACCCACTTCTCAGTTCGGAAGGAGATTTGGCCATGATTCAAGTCTGTTTTTCTCTCCTCCTGCAAACAATGGCGGATATGGAGATACCCATCAGTAA 456 42.54 EMASSSNYSNSPCAACKFLRRKCLPNCIFAPYFPPEEPQKFVNVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISILQKQVLRLKKELDATNADLIRYAYNELPTSQFGRRFGHDSSLFFSPPANNGGYGDTHQ 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 30097229 30097684 + Bma012152.1 Bma14g01484 95465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01484 151 Coils Coil 91 111 - -
Bma14g01484 151 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Bma14g01484 151 Pfam Lateral organ boundaries (LOB) domain 12 108 IPR004883 -
Bma14g01484 151 PANTHER PROTEIN LATERAL ORGAN BOUNDARIES 5 124 - -
Bma14g01484 151 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 124 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00188 Bma-Chr3:1449246 Bma14g01484 Bma-Chr14:30097229 3.67E-46 dispersed
Bma08g00088 Bma-Chr8:1029617 Bma14g01484 Bma-Chr14:30097229 1.23E-68 dispersed
Bma14g01484 Bma-Chr14:30097229 Bma14g01508 Bma-Chr14:30351599 9.59E-112 dispersed
Bma14g01484 Bma-Chr14:30097229 Bma12g01049 Bma-Chr12:42560363 2.78E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58392 PF03195 LOB 2.40E-41 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01484 - - jre:109021641 242.662