Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01528 ATGTTTTCATTAGATACTGATTTTGCTGGTGCGTTGAAAATTGGTGAAGGAGTGAGAATGATGATGAGCATGGAAGATACTTCAAGAAGGCGACCTTTTTTTAGCTCGCAGGACGACATGTTCGACGAGGAGTACTACGACGAACAGATGCCGGACAAGAAGCGTCGCCTCACGCAAGAGCAGGTGGTTCTTCTGGAGAAGAGCTTTGAGGCAGAAAACAAACTGGAGCCAGACCGAAAGACCCAATTGGCAAACAAGCTTGGGCTGCAGCCGAGGCAAGTTGCTGTGTGGTTTCAGAACCGCCGTGCCCGTTGGAAGACCAAGCAGCTTGAAAGGGAGTATGATGTTCTGAAATCTACATATGATTCACTTCTTTCTAATTATGACTCTGTCGTCAAAGAGAACGAAAAGCTCAAATCCGAGGTTGTTTCCTTATCTGAGAAACTAGAAGCAAAAGAGGCAGTTGGAATTTCAAATCTGCCCAAGAAATCCGTCACTTCGACATTAGATATCACACCCATCTCTTCCAATTTCGGCATCAAGTTGGAAGATGGGTGGAGCACCGGAACAGGTGGAAGCACGGTGGTGGATGAGGATGGTCCTCAACTTCTGGACAGTGGCAATTCTTATTTTCTGAGCAACGACTGCACTGTCATCGACAGCATGCATTCTGAGGAGGACGACCAGAGTGACGATGGCCGTAGTTGCTTCCACGATGTCTTTGCACAAAACCATGTGGAGGTAGAGTCTCTTGTCTGGTGGGACTGGTCTTGA 774 47.42 MFSLDTDFAGALKIGEGVRMMMSMEDTSRRRPFFSSQDDMFDEEYYDEQMPDKKRRLTQEQVVLLEKSFEAENKLEPDRKTQLANKLGLQPRQVAVWFQNRRARWKTKQLEREYDVLKSTYDSLLSNYDSVVKENEKLKSEVVSLSEKLEAKEAVGISNLPKKSVTSTLDITPISSNFGIKLEDGWSTGTGGSTVVDEDGPQLLDSGNSYFLSNDCTVIDSMHSEEDDQSDDGRSCFHDVFAQNHVEVESLVWWDWS 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 30830161 30831876 + Bma012200.1 Bma14g01528 95509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01528 257 Pfam Homeodomain 53 106 IPR001356 GO:0003677
Bma14g01528 257 ProSitePatterns 'Homeobox' domain signature. 83 106 IPR017970 GO:0000981|GO:0006355
Bma14g01528 257 Gene3D - 45 116 - -
Bma14g01528 257 Coils Coil 107 155 - -
Bma14g01528 257 SUPERFAMILY Homeodomain-like 38 110 IPR009057 -
Bma14g01528 257 CDD homeodomain 53 109 IPR001356 GO:0003677
Bma14g01528 257 PRINTS Lambda-repressor HTH signature 79 88 IPR000047 GO:0003677
Bma14g01528 257 PRINTS Lambda-repressor HTH signature 88 104 IPR000047 GO:0003677
Bma14g01528 257 SMART HOX_1 51 112 IPR001356 GO:0003677
Bma14g01528 257 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 14 243 IPR045224 GO:0003700
Bma14g01528 257 ProSiteProfiles 'Homeobox' domain profile. 48 108 IPR001356 GO:0003677
Bma14g01528 257 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5 14 243 - -
Bma14g01528 257 Pfam Homeobox associated leucine zipper 108 149 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00130 Bma-Chr6:1738339 Bma14g01528 Bma-Chr14:30830161 2.65E-26 dispersed
Bma13g00523 Bma-Chr13:10477448 Bma14g01528 Bma-Chr14:30830161 8.65E-124 dispersed
Bma14g01528 Bma-Chr14:30830161 Bma15g01059 Bma-Chr15:42550266 2.84E-38 dispersed
Bma14g01528 Bma-Chr14:30830161 Bma09g00105 Bma-Chr9:2910543 9.65E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58396 PF00046 Homeodomain 2.10E-17 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01528 K09338 - jre:108992866 325.865