Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01544 ATGGGACTAGTGCCTAACTATGTCGGTGCTTGGAGCGCTGGAAAATCTAAGGGAAGGATGAAAGATGATGAAGATGAGAGGATGGGTTGTTGGATTAAAATGAGATTTTTTAGAAGCTGCATTTCATCGAGATCGAAAGTAGACAGCTCGATAAGTGGCACAAGCACTCAATGTGAAAGTAAGTCCACGATTGATATGAGCGAAGACCAACCAGTTGCACCAGTTCCATCATCTTCAACTACCAGCAATACTGAGAGTGCTCTATCTACTATCAATATAGAAGAAGAACTTAAAATTGCTTCTCAGCTTCGGAAATTTGCTTTTCATGAGCTGAAGTCATCCACAAGAAATTTTAGACCAGAAAGCCTTCTTGGTGAAGGAGGGTTTGGCTGTGTATTCAAGGGGTGGATCAATGAGAATGGATCAACTCCTGTAAAACCTGGCACAGGCCTTGCAGTTGCCGTGAAAACCCTTAATCACGATGGACTTCAGGGTCATAAAGAATGGCTTGCTGAAGTTAATTATCTTGGTGACCTTCTACATCCAAACTTAGTTAAATTAATTGGATATTGTATTGAGGATGATCAACGGCTTCTCGTTTATGAATTTATGCCTCGAGGAAGTTTGGAGAATCATCTTTTTAGAAGATCACTGCCTCTTCCTTGGTTAATAAGAATGAAAATTGCAGTCGGTGCTGCTAAGGGCCTTGCCTTTCTGCATGAGGAAGCTGAGAGGCCTGTAATTTATCGAGATTTTAAGACATCCAATATCTTGTTAGACGTGGATTATAATGCCAAGCTTTCTGATTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACTCACGTATCTACTCGAGTGATGGGAACTTATGGCTATGCTGCCCCCGAATATGTTATGACAGGACATCTTACATCAAAGAGTGATGTTTATAGTTTTGGGGTTGTGCTGCTCGAGATGCTAACTGGGCGGAGATCCATGGACAAAAACCGACCTAACGGAGAGCATAATTTGGTGGAATGGGCACGCCCACAACTCGGAGAAAGACGAAGGTTTCATCGACTTATCGATCCACGTCTCGAAGGGCGATTCTCAATCAAAGGGGCCCAAAAAGCTATTCAATTGGCTTCCCACTGCCTAAACCGAGACCCAAAAGCCAGACCCTTGATGAGTGAAGTCGTTCAAGTGCTCAAGCCTCTTCCCAATCTCAAGGACATGGCCTCTTCTTCCTCCTTCTTCCAAGCCATGCAAATTGACCGTGTGGGGTCTAACTCAAGTAGTAGAAATGGCATTAGAATTCAACCAGGGTTGTCCAAGAAGGGTCAGCCAATCAGAAGCCTCTCCTTCAGTCCGAATGACTCGCCATATTATCAGGTACTTCCTCACCCGTCTCCTAAGCCTGATTTTCGACCGTAA 1419 43.83 MGLVPNYVGAWSAGKSKGRMKDDEDERMGCWIKMRFFRSCISSRSKVDSSISGTSTQCESKSTIDMSEDQPVAPVPSSSTTSNTESALSTINIEEELKIASQLRKFAFHELKSSTRNFRPESLLGEGGFGCVFKGWINENGSTPVKPGTGLAVAVKTLNHDGLQGHKEWLAEVNYLGDLLHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWLIRMKIAVGAAKGLAFLHEEAERPVIYRDFKTSNILLDVDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFHRLIDPRLEGRFSIKGAQKAIQLASHCLNRDPKARPLMSEVVQVLKPLPNLKDMASSSSFFQAMQIDRVGSNSSSRNGIRIQPGLSKKGQPIRSLSFSPNDSPYYQVLPHPSPKPDFRP 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 31239035 31242471 - Bma012220.1 Bma14g01544 95525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01544 472 MobiDBLite consensus disorder prediction 47 87 - -
Bma14g01544 472 Gene3D Transferase(Phosphotransferase) domain 1 204 420 - -
Bma14g01544 472 MobiDBLite consensus disorder prediction 423 472 - -
Bma14g01544 472 Gene3D Phosphorylase Kinase; domain 1 98 203 - -
Bma14g01544 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Bma14g01544 472 PANTHER OS01G0588500 PROTEIN-RELATED 52 453 - -
Bma14g01544 472 ProSiteProfiles Protein kinase domain profile. 118 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g01544 472 CDD STKc_IRAK 124 401 - -
Bma14g01544 472 ProSitePatterns Protein kinases ATP-binding region signature. 124 156 IPR017441 GO:0005524
Bma14g01544 472 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 52 453 - -
Bma14g01544 472 MobiDBLite consensus disorder prediction 442 458 - -
Bma14g01544 472 SUPERFAMILY Protein kinase-like (PK-like) 104 420 IPR011009 -
Bma14g01544 472 Pfam Protein kinase domain 121 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01866 Bma-Chr1:68420024 Bma14g01544 Bma-Chr14:31239035 2.95E-152 dispersed
Bma03g00130 Bma-Chr3:1002493 Bma14g01544 Bma-Chr14:31239035 2.17E-155 dispersed
Bma04g00670 Bma-Chr4:6448642 Bma14g01544 Bma-Chr14:31239035 4.51E-145 dispersed
Bma04g01366 Bma-Chr4:46929507 Bma14g01544 Bma-Chr14:31239035 2.05E-61 dispersed
Bma06g00669 Bma-Chr6:35919201 Bma14g01544 Bma-Chr14:31239035 0 dispersed
Bma11g00612 Bma-Chr11:9251429 Bma14g01544 Bma-Chr14:31239035 1.06E-140 dispersed
Bma14g01544 Bma-Chr14:31239035 Bma04g01242 Bma-Chr4:36845565 1.88E-155 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66908 PF00069 Pkinase 4.30E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01544 - - vvi:100853083 751.895