Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01573 TCTTTTTTTCTCCTCAAATTTCCATCCTTTTCAGCCATGGCTTCTCCATCTCCTCTTCTACTGCTCTTCTGTTGTCTAGCATGCATGGTTTCGTCCTCGCAGGCGAGTTCTCGTAAGCAGCCAAACATTACCAAGCCCAACACGACCGCGATGAACGTAATCGACGCCTGCTGGCGGACCAAAGCTAACTGGGCGGCGAACCGTCAGGCATTGGCAGACTGCGCGGTGGGCTTTGGAAAGGACGCGATCGGAGGAAAGTTTGGCAATATCTACGTTGTCACTGATTGCTCCGACGACCCGGTTAACCCAAAACCAGGAACATTACGCTACGGTGTAATTCAACTGAAGCCATTGTGGATCGTGTTTGCTAGGGATATGGTTATTGTCCTAAAAAGTGAGCTACTTGTGACTAGTTACAAGACGATCGACGGAAGAGGGGTGGACGTGGAAATTGCGAACGGGCCATGCATCACTCTGCAGTATGTTAGTCATGTGATTATCCATGGAATTAGCATCCACGACTGTAAACCAAGCAAACCCGGGCTTGTTCGGAGCAGCACTGCGCACGTCGGATATCGTCAACAATCGGACGGAGACGGCATTGATGTATTCGGGTGTTCGCATATTTGGATCGACCACTGCTTCCTCGCCCGCTGCACCGACGGACTCATTGACGTCATACATGCTTCTACTGCAGTAACCATCACCAACAACTATTTCACTCAGCATGATAAAGTGATGCTGCTTGGACACAATGATCAGTATTCCGATGATAGAGTGATGAAAGTCACTGTAGCCTTCAACCGCTTTGGTGCTAGCCTCATAGAGAGGATGCCCAGGGTAAGATTTGGGTATGCCCACGTTGCCAACAATAAATACGAGGAGTGGGAGATGTACGCCATTGGCGGCAGCGCTAATCCAACCATACTCAGTGAAGGAAACTACTTCGTAGCAGGCAATATTCCTACATTCAAACAGGTTACAAAGAGAGAGGTGAGTGGTGGATGGAAGAACTGGAAATGGAGGTCTTCTAATGATGTGTTTATAAATGGTGCTTACTTTGTGCAATCTGGATGGGGAAGCTGTAGTCCACTTTACAGTCAAAGTCAGTCATTTCGAGTTGCTCCAGGGTCATTGGTTCCTGCTTTAACTCTTGGCGCAGGCCCTTTGCGTTGTGCCATTGGTAAAACTTGCTGA 1197 48.54 SFFLLKFPSFSAMASPSPLLLLFCCLACMVSSSQASSRKQPNITKPNTTAMNVIDACWRTKANWAANRQALADCAVGFGKDAIGGKFGNIYVVTDCSDDPVNPKPGTLRYGVIQLKPLWIVFARDMVIVLKSELLVTSYKTIDGRGVDVEIANGPCITLQYVSHVIIHGISIHDCKPSKPGLVRSSTAHVGYRQQSDGDGIDVFGCSHIWIDHCFLARCTDGLIDVIHASTAVTITNNYFTQHDKVMLLGHNDQYSDDRVMKVTVAFNRFGASLIERMPRVRFGYAHVANNKYEEWEMYAIGGSANPTILSEGNYFVAGNIPTFKQVTKREVSGGWKNWKWRSSNDVFINGAYFVQSGWGSCSPLYSQSQSFRVAPGSLVPALTLGAGPLRCAIGKTC 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 32423807 32425736 + Bma012262.1 Bma14g01573 95554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01573 398 SUPERFAMILY Pectin lyase-like 51 389 IPR011050 -
Bma14g01573 398 PANTHER PECTATE LYASE 22 397 - -
Bma14g01573 398 Pfam Pectate lyase 131 316 IPR002022 -
Bma14g01573 398 Gene3D - 51 391 IPR012334 -
Bma14g01573 398 PANTHER PECTATE LYASE 18-RELATED 22 397 IPR045032 GO:0030570
Bma14g01573 398 PRINTS Pollen allergen Amb family signature 277 296 IPR018082 -
Bma14g01573 398 PRINTS Pollen allergen Amb family signature 299 318 IPR018082 -
Bma14g01573 398 PRINTS Pollen allergen Amb family signature 97 122 IPR018082 -
Bma14g01573 398 PRINTS Pollen allergen Amb family signature 339 363 IPR018082 -
Bma14g01573 398 PRINTS Pollen allergen Amb family signature 133 149 IPR018082 -
Bma14g01573 398 PRINTS Pollen allergen Amb family signature 197 218 IPR018082 -
Bma14g01573 398 PRINTS Pollen allergen Amb family signature 369 392 IPR018082 -
Bma14g01573 398 PRINTS Pollen allergen Amb family signature 74 91 IPR018082 -
Bma14g01573 398 SMART amb_all 125 322 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01699 Bma-Chr1:51761013 Bma14g01573 Bma-Chr14:32423807 0 dispersed
Bma14g01573 Bma-Chr14:32423807 Bma06g00238 Bma-Chr6:3163295 8.85E-150 dispersed
Bma14g01573 Bma-Chr14:32423807 Bma04g01050 Bma-Chr4:19126066 4.00E-150 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01573 K01728 - zju:107419217 591.267