Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g01573 | TCTTTTTTTCTCCTCAAATTTCCATCCTTTTCAGCCATGGCTTCTCCATCTCCTCTTCTACTGCTCTTCTGTTGTCTAGCATGCATGGTTTCGTCCTCGCAGGCGAGTTCTCGTAAGCAGCCAAACATTACCAAGCCCAACACGACCGCGATGAACGTAATCGACGCCTGCTGGCGGACCAAAGCTAACTGGGCGGCGAACCGTCAGGCATTGGCAGACTGCGCGGTGGGCTTTGGAAAGGACGCGATCGGAGGAAAGTTTGGCAATATCTACGTTGTCACTGATTGCTCCGACGACCCGGTTAACCCAAAACCAGGAACATTACGCTACGGTGTAATTCAACTGAAGCCATTGTGGATCGTGTTTGCTAGGGATATGGTTATTGTCCTAAAAAGTGAGCTACTTGTGACTAGTTACAAGACGATCGACGGAAGAGGGGTGGACGTGGAAATTGCGAACGGGCCATGCATCACTCTGCAGTATGTTAGTCATGTGATTATCCATGGAATTAGCATCCACGACTGTAAACCAAGCAAACCCGGGCTTGTTCGGAGCAGCACTGCGCACGTCGGATATCGTCAACAATCGGACGGAGACGGCATTGATGTATTCGGGTGTTCGCATATTTGGATCGACCACTGCTTCCTCGCCCGCTGCACCGACGGACTCATTGACGTCATACATGCTTCTACTGCAGTAACCATCACCAACAACTATTTCACTCAGCATGATAAAGTGATGCTGCTTGGACACAATGATCAGTATTCCGATGATAGAGTGATGAAAGTCACTGTAGCCTTCAACCGCTTTGGTGCTAGCCTCATAGAGAGGATGCCCAGGGTAAGATTTGGGTATGCCCACGTTGCCAACAATAAATACGAGGAGTGGGAGATGTACGCCATTGGCGGCAGCGCTAATCCAACCATACTCAGTGAAGGAAACTACTTCGTAGCAGGCAATATTCCTACATTCAAACAGGTTACAAAGAGAGAGGTGAGTGGTGGATGGAAGAACTGGAAATGGAGGTCTTCTAATGATGTGTTTATAAATGGTGCTTACTTTGTGCAATCTGGATGGGGAAGCTGTAGTCCACTTTACAGTCAAAGTCAGTCATTTCGAGTTGCTCCAGGGTCATTGGTTCCTGCTTTAACTCTTGGCGCAGGCCCTTTGCGTTGTGCCATTGGTAAAACTTGCTGA | 1197 | 48.54 | SFFLLKFPSFSAMASPSPLLLLFCCLACMVSSSQASSRKQPNITKPNTTAMNVIDACWRTKANWAANRQALADCAVGFGKDAIGGKFGNIYVVTDCSDDPVNPKPGTLRYGVIQLKPLWIVFARDMVIVLKSELLVTSYKTIDGRGVDVEIANGPCITLQYVSHVIIHGISIHDCKPSKPGLVRSSTAHVGYRQQSDGDGIDVFGCSHIWIDHCFLARCTDGLIDVIHASTAVTITNNYFTQHDKVMLLGHNDQYSDDRVMKVTVAFNRFGASLIERMPRVRFGYAHVANNKYEEWEMYAIGGSANPTILSEGNYFVAGNIPTFKQVTKREVSGGWKNWKWRSSNDVFINGAYFVQSGWGSCSPLYSQSQSFRVAPGSLVPALTLGAGPLRCAIGKTC | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 32423807 | 32425736 | + | Bma012262.1 | Bma14g01573 | 95554 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g01573 | 398 | SUPERFAMILY | Pectin lyase-like | 51 | 389 | IPR011050 | - | |
Bma14g01573 | 398 | PANTHER | PECTATE LYASE | 22 | 397 | - | - | |
Bma14g01573 | 398 | Pfam | Pectate lyase | 131 | 316 | IPR002022 | - | |
Bma14g01573 | 398 | Gene3D | - | 51 | 391 | IPR012334 | - | |
Bma14g01573 | 398 | PANTHER | PECTATE LYASE 18-RELATED | 22 | 397 | IPR045032 | GO:0030570 | |
Bma14g01573 | 398 | PRINTS | Pollen allergen Amb family signature | 277 | 296 | IPR018082 | - | |
Bma14g01573 | 398 | PRINTS | Pollen allergen Amb family signature | 299 | 318 | IPR018082 | - | |
Bma14g01573 | 398 | PRINTS | Pollen allergen Amb family signature | 97 | 122 | IPR018082 | - | |
Bma14g01573 | 398 | PRINTS | Pollen allergen Amb family signature | 339 | 363 | IPR018082 | - | |
Bma14g01573 | 398 | PRINTS | Pollen allergen Amb family signature | 133 | 149 | IPR018082 | - | |
Bma14g01573 | 398 | PRINTS | Pollen allergen Amb family signature | 197 | 218 | IPR018082 | - | |
Bma14g01573 | 398 | PRINTS | Pollen allergen Amb family signature | 369 | 392 | IPR018082 | - | |
Bma14g01573 | 398 | PRINTS | Pollen allergen Amb family signature | 74 | 91 | IPR018082 | - | |
Bma14g01573 | 398 | SMART | amb_all | 125 | 322 | IPR002022 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01699 | Bma-Chr1:51761013 | Bma14g01573 | Bma-Chr14:32423807 | 0 | dispersed | |
Bma14g01573 | Bma-Chr14:32423807 | Bma06g00238 | Bma-Chr6:3163295 | 8.85E-150 | dispersed | |
Bma14g01573 | Bma-Chr14:32423807 | Bma04g01050 | Bma-Chr4:19126066 | 4.00E-150 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g01573 | K01728 | - | zju:107419217 | 591.267 |