Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g01592 | ATGGCCGGTGGAGTGGCCGGCGACGGAGAGAGTACTCCCGGACTACTGTTGCTTGACCTTCTTCAAGACGTTATCGGTACCTCTTCTGGGATAGTCTCCAGCGACATGTTCAAGAAGGACTGTACCGATCTGGTGCGTCGGATCGCTCTCTTAAGCCACTTGTTTGAAGAGATTAGGGATTTGAAGATGGCCGGTGAATTTGGAGCTCCCGATGCGTCGACTTCGTTGCCTTCCTCTTCGAAAACCGGTAGTGGGAATGAGCTCTCCTGGCTATCGGATCTGGTTTTAGCTCTGAAGGCCGCCAAGCGACTTCTTTTCGTTGCTCGTACTTTCATTTCCGGCAATGTCTCTTCTGATGGAACTGCCAAGAAAATAGCATTCCAATTTGAATGTGTTACATGGAAGTTAGAGAAAGCATTGGGAAACATACCATTTGATCGATTTGACATCTCAGAGGAAGTTCAAGAACAGGTGGAGTTGGTAAGAGCACAATTGAGAAGAGCTGCCAAAAAGTATGGATCACCACCTTCAGTTACACAATCTGTTCTCTCTCAGGACAGAGAAATAAGCATCTTATTATCAGAGCATTTGTCAAACGATGTTTCTTTTGAGAATTCGGATAGTATAGATGATGACATTACTGTGAAGATGGATACTTTTTGCGACAGCAATACATTGATCAGCCGTAGTAATGAACAGAGAACTCAATTGTTGGAAAGATCGAGAAATGTTTCTACTTCAGATCTCTCTTCAAATGATGCTAATGCTGAAGGTCCCGGCAACTCAGTAAATGAGAGTGTGGATGAGAACAAGAAGTCTGATGCAAATATTATACCTGATGATTTTTTATGCCCCATATCTCTAGAATTAATGAGAGACCCTGTTATTGTGTCCACAGGACAGACGTATGAAAGATCCTACATTCAAAGATGGATAGATTGTGGCAACACAACATGTCCAAAAACCCAGCAGAAGCTTCAAAATTTAACTCTTACCCCGAATTACGTTCTGAGAAGTCTCATCTCTCAATGGTGCCTGAAGCACAATTTTGAACAACCAACAGGATTAACCAATGGAAAAATCAAAAAGTGTGATGGAACATATCGCGATGTTTGTGCTGAAATAGCAGCCATTGAAGCTTTGGTTTGCAAACTCTCTGGCCATTCGCTTGAGGAGCAGAGAGCAGCAGTAACTGAACTTCGATCTCTATCCAAAAGAAGTACAGATAACAGAATACTAATAGCAGAAGCTGGAGCCATTCCAGCTCTAGTCAACCTTTTAACGTCAGACGATGTCTTAATACAAGAGAATGCAGTCACTTCTATCCTTAACCTTTCGATATATGAAAACAACAAAGGACTCATCATGCTAGTTGGGGCTGTTCCTTCTATTGTCCAGGTTCTTAGGATCGGCAGCATGGAAGCTAGAGAAAATGCAGCAGCTACCCTCTTCAGCCTCTCTCTTGCAGATGAAAACCGGATAATAATTGGCGCATCTGGGGCAATCCCAGCATTGGTAGAATTGCTTCAAAACGGGAGCACGAGAGGTAAGAAAGATGCAGCCACAGCTCTATTCAATTTATGCATTTATCAGGGCAACAAAGGCCGAGCTGTAAGGGCCGGAATTGTCCTGGCCCTGTTGAAGATGCTTACGGACTCAAATTCATGCATGGTCGACGAGGCTCTTACAATAATGTCTGTTCTTGCCAATCATCAAGAAGCAAAAGTTGCCATTGTAAAAGCCAGCACCATACCAGTTTTGATCGACCTCGTGAGGACGAGTTTGCCTCGTAATAAAGAAAATTCTGCTGCCATTTTACTTGCATTGTGCAAGAGAGATTCCGAAAATCTCGCATGTATCAGTAGGCTTGGAGCCATAATACCACTAACCGAGCTTGCAAGAAGTGGCACGGAAAGAGCGAAAAGGAAAGCTAATTCATTGCTGGACCATCTTCGAAAAATACAACAGCATTAG | 1974 | 43.41 | MAGGVAGDGESTPGLLLLDLLQDVIGTSSGIVSSDMFKKDCTDLVRRIALLSHLFEEIRDLKMAGEFGAPDASTSLPSSSKTGSGNELSWLSDLVLALKAAKRLLFVARTFISGNVSSDGTAKKIAFQFECVTWKLEKALGNIPFDRFDISEEVQEQVELVRAQLRRAAKKYGSPPSVTQSVLSQDREISILLSEHLSNDVSFENSDSIDDDITVKMDTFCDSNTLISRSNEQRTQLLERSRNVSTSDLSSNDANAEGPGNSVNESVDENKKSDANIIPDDFLCPISLELMRDPVIVSTGQTYERSYIQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLISQWCLKHNFEQPTGLTNGKIKKCDGTYRDVCAEIAAIEALVCKLSGHSLEEQRAAVTELRSLSKRSTDNRILIAEAGAIPALVNLLTSDDVLIQENAVTSILNLSIYENNKGLIMLVGAVPSIVQVLRIGSMEARENAAATLFSLSLADENRIIIGASGAIPALVELLQNGSTRGKKDAATALFNLCIYQGNKGRAVRAGIVLALLKMLTDSNSCMVDEALTIMSVLANHQEAKVAIVKASTIPVLIDLVRTSLPRNKENSAAILLALCKRDSENLACISRLGAIIPLTELARSGTERAKRKANSLLDHLRKIQQH | 657 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 32906392 | 32909745 | + | Bma012285.1 | Bma14g01592 | 95573 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g01592 | 657 | ProSiteProfiles | U-box domain profile. | 277 | 351 | IPR003613 | GO:0004842|GO:0016567 | |
Bma14g01592 | 657 | CDD | RING-Ubox_PUB | 282 | 324 | IPR045210 | - | |
Bma14g01592 | 657 | SMART | Ubox_2 | 281 | 344 | IPR003613 | GO:0004842|GO:0016567 | |
Bma14g01592 | 657 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 260 | 356 | IPR013083 | - | |
Bma14g01592 | 657 | Gene3D | - | 448 | 558 | IPR011989 | - | |
Bma14g01592 | 657 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 500 | 542 | IPR000225 | GO:0005515 | |
Bma14g01592 | 657 | Pfam | Armadillo/beta-catenin-like repeat | 490 | 528 | IPR000225 | GO:0005515 | |
Bma14g01592 | 657 | Pfam | Armadillo/beta-catenin-like repeat | 408 | 446 | IPR000225 | GO:0005515 | |
Bma14g01592 | 657 | Coils | Coil | 151 | 171 | - | - | |
Bma14g01592 | 657 | SUPERFAMILY | RING/U-box | 276 | 351 | - | - | |
Bma14g01592 | 657 | SMART | arm_5 | 407 | 447 | IPR000225 | GO:0005515 | |
Bma14g01592 | 657 | SMART | arm_5 | 530 | 570 | IPR000225 | GO:0005515 | |
Bma14g01592 | 657 | SMART | arm_5 | 489 | 529 | IPR000225 | GO:0005515 | |
Bma14g01592 | 657 | SMART | arm_5 | 571 | 611 | IPR000225 | GO:0005515 | |
Bma14g01592 | 657 | SMART | arm_5 | 448 | 488 | IPR000225 | GO:0005515 | |
Bma14g01592 | 657 | PANTHER | U BOX DOMAIN-CONTAINING | 24 | 654 | - | - | |
Bma14g01592 | 657 | MobiDBLite | consensus disorder prediction | 232 | 266 | - | - | |
Bma14g01592 | 657 | Pfam | U-box domain | 278 | 348 | IPR003613 | GO:0004842|GO:0016567 | |
Bma14g01592 | 657 | SUPERFAMILY | ARM repeat | 371 | 651 | IPR016024 | - | |
Bma14g01592 | 657 | Gene3D | - | 361 | 447 | IPR011989 | - | |
Bma14g01592 | 657 | Gene3D | - | 559 | 657 | IPR011989 | - | |
Bma14g01592 | 657 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 459 | 501 | IPR000225 | GO:0005515 | |
Bma14g01592 | 657 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 418 | 460 | IPR000225 | GO:0005515 | |
Bma14g01592 | 657 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 11 | 24 | 654 | - | - | |
Bma14g01592 | 657 | MobiDBLite | consensus disorder prediction | 232 | 270 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00183 | Bma-Chr8:2239876 | Bma14g01592 | Bma-Chr14:32906392 | 1.07E-06 | dispersed | |
Bma09g00589 | Bma-Chr9:43052668 | Bma14g01592 | Bma-Chr14:32906392 | 4.84E-20 | dispersed | |
Bma14g00501 | Bma-Chr14:5627796 | Bma14g01592 | Bma-Chr14:32906392 | 5.35E-08 | dispersed | |
Bma14g01202 | Bma-Chr14:17930075 | Bma14g01592 | Bma-Chr14:32906392 | 1.32E-49 | dispersed | |
Bma14g01592 | Bma-Chr14:32906392 | Bma15g00525 | Bma-Chr15:6058597 | 4.57E-78 | dispersed | |
Bma15g00190 | Bma-Chr15:1948368 | Bma14g01592 | Bma-Chr14:32906392 | 1.27E-59 | dispersed | |
Bma14g01592 | Bma-Chr14:32906392 | Bma11g00122 | Bma-Chr11:1154400 | 6.10E-14 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g01592 | - | - | csv:101221534 | 884.789 |