Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01593 ATGGAGATACCACCTCCATCACACCCCACCTATGATTTAAAAGGCACCATCAAATTAGCACTTGCTGAGGATTCTGCTGATATTGGAGATGTAACATCTATGGCCACTATTCCATCTGACATGGAAGTGGAAGCCTATTTCTTGGCAAAGGAAGACGGTATTGTTGCTGGAATTGCTCTTGCAGAGATGGTTTTTCATGAAGTTGATCCTTCCATTAAGGTGGAATGGACTAAAAAAGATGGAGATTACATTTACAAAGGACTGCAGTTTGGAAAAGTTTCTGGGCGGGCACAAAACATTGTTAAGGCTGAAAGGATTGTGCTTAATTTTATGCAGAGAATGAGCGGAATTGCTACTCTAACCAAGGCAATGGCGGAAGCTGCATTTCCTGCACGCATGTTAGAAACTAGAAAAACTGCTCCGGGATTACGTTTGGTGGATAAGTGGGCGGTACTGATAGGTGGAGGCCAGAATCACCGACTGGGTTTATTCGATATGGTGTTGATAAAAGACAATCATATATCAATAGCAGGAGGCATAACAAATGCTATTAAATCTGTTGACTCATACCTACAACAAAACAACCTTAAAATGGAAGTCGAGGTTGAAACTAGAACACTTGAGGAAGTGAAAGAGGTGCTGAATTATGCATCTCAAACGAAGACATGCTTGACTAGGATAATGTTAGACAATATGGTAATACCTTCATCCAACGGCGACGTGGACGTAACCATGCTTAAAGAAGCTGTCGAAATAATTAATGGGAGTTTCGAAACAGAGGCATCGGGTAATGTTACCTTGGAAACTGTGGGGAAAATTGGACAAACTGGAGTGACCTACGTATCTAGCGGTGCTCTGACTCATTCTGTAAAAGCGCTTGACATATCCCTGAAGATTGACACAGAGTTAGCCCTTCAAGTTGGCAGACGCACTAATCGAGCGTAA 945 42.22 MEIPPPSHPTYDLKGTIKLALAEDSADIGDVTSMATIPSDMEVEAYFLAKEDGIVAGIALAEMVFHEVDPSIKVEWTKKDGDYIYKGLQFGKVSGRAQNIVKAERIVLNFMQRMSGIATLTKAMAEAAFPARMLETRKTAPGLRLVDKWAVLIGGGQNHRLGLFDMVLIKDNHISIAGGITNAIKSVDSYLQQNNLKMEVEVETRTLEEVKEVLNYASQTKTCLTRIMLDNMVIPSSNGDVDVTMLKEAVEIINGSFETEASGNVTLETVGKIGQTGVTYVSSGALTHSVKALDISLKIDTELALQVGRRTNRA 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 32915356 32918575 - Bma012286.1 Bma14g01593 95574

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01593 314 Pfam Quinolinate phosphoribosyl transferase, C-terminal domain 117 298 IPR002638 GO:0004514|GO:0009435
Bma14g01593 314 TIGRFAM nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 17 299 IPR004393 GO:0004514|GO:0009435
Bma14g01593 314 PANTHER NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] 8 308 - -
Bma14g01593 314 PIRSF NadC_ModD 8 302 IPR027277 -
Bma14g01593 314 CDD QPRTase 17 298 IPR004393 GO:0004514|GO:0009435
Bma14g01593 314 Gene3D Aldolase class I 129 289 IPR013785 -
Bma14g01593 314 PANTHER NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] 8 308 IPR027277 -
Bma14g01593 314 Pfam Quinolinate phosphoribosyl transferase, N-terminal domain 28 115 IPR022412 GO:0016763
Bma14g01593 314 SUPERFAMILY Nicotinate/Quinolinate PRTase N-terminal domain-like 6 116 - -
Bma14g01593 314 SUPERFAMILY Nicotinate/Quinolinate PRTase C-terminal domain-like 117 299 IPR036068 GO:0009435
Bma14g01593 314 Gene3D - 20 297 IPR037128 GO:0016763
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01593 K00767 nadC, QPRT; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] - egr:104453720 517.309
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g415 . . . . . . Bma14g01593 . Cmo04g01079 . Cma04g01001 . Car04g00939 . . . . . . . . . . . Cla07g00598 Cam07g0626 Cec07g0692 Cco07g0672 Clacu07g0630 Cmu07g0656 Cre07g1003 Cone13ag0769 . . . Lsi04g01137 . . Cme10g01500 . Blo11g00734 . . Bpe11g01607 . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g01042 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003846 2 3 1 1 2 2 1 2 2 0 2 1 1 1 1 1 2 1 1 2 1 1 1 1 0 1 1 6 2 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g01593 Bma_Chr14 FPKM 0.09064 0.0 0.304626 0.349648 0.0 0.031273 0.102689 0.397085 0.651937 0.520452