Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01608 ATGGCGTTTTTCCCAGCAAACTTTTTCTTGCGTACTTCTCAAGAAGATGCACACCAACCTCCCACCATTAATGGAGTTCTTCCTTCATGCGCACCTCAAGATTTTCATGGAGTTACAGTACCGTTTGTAGGGAAGAGATGTAGGCCATTTTCCGGAGTGGATTTGGTCGGGGAAGAAGGCAACAATGGGGACGACGATCTGTCCGACGATGGATCACAAATGGGGGAGAAGAAGAAGAGGCTGAATATGGAGCAAGTTAAGACACTCGAGAAGAATTTTGAGTTGGGAAACAAGCTAGAGCCTGAGAGAAAACTGCAGTTGGCTAGGGTTCTTGGTCTGCAACCCAGACAGATTGCAATCTGGTTTCAGAACAGAAGAGCAAGGTGGAAGACAAAGCAGCTGGAGAAAGACTATGATCTTCTTAAACGACAGTTTGAAGCCATTAAAGCAGATAATGAGACTCTCCAAGCCAGAAACAAAAGGCTTCAAGATGAGATGATGGTTTTGAAAGGTAGAAAGCCAACAGAATCTATCAACCTCAACAAAGAAACAGAAGGATCTTGTAGTAATAGAAGTGAGAACAGCTCTGATATTAGGCTGGATATCTCCATGACACCACCCATTGACAGCCCTTCTTTCCGGCCTTTATTTCCATCGTCTTCTTCGAAGCCCCCTCCGGCCATGGCCCACCTCTTCGGAACCTCCTCGAGACCGGACGATCACCTCCAATGGCAGAAAATCGACCAGATGGTTAAAGAAGAAAGCTTAGGCAATATGTTTTGTGGAATTGAAGATCAGTCTGGGTTTTGGCCATTGTTGGAGCAGCAACAATTTAATGGATGA 843 45.31 MAFFPANFFLRTSQEDAHQPPTINGVLPSCAPQDFHGVTVPFVGKRCRPFSGVDLVGEEGNNGDDDLSDDGSQMGEKKKRLNMEQVKTLEKNFELGNKLEPERKLQLARVLGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNETLQARNKRLQDEMMVLKGRKPTESINLNKETEGSCSNRSENSSDIRLDISMTPPIDSPSFRPLFPSSSSKPPPAMAHLFGTSSRPDDHLQWQKIDQMVKEESLGNMFCGIEDQSGFWPLLEQQQFNG 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 33712885 33730095 - Bma012308.1 Bma14g01608 95589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01608 280 SUPERFAMILY Homeodomain-like 66 134 IPR009057 -
Bma14g01608 280 MobiDBLite consensus disorder prediction 180 196 - -
Bma14g01608 280 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 279 - -
Bma14g01608 280 Pfam Homeodomain 77 130 IPR001356 GO:0003677
Bma14g01608 280 Coils Coil 124 172 - -
Bma14g01608 280 PRINTS Lambda-repressor HTH signature 112 128 IPR000047 GO:0003677
Bma14g01608 280 PRINTS Lambda-repressor HTH signature 103 112 IPR000047 GO:0003677
Bma14g01608 280 Gene3D - 69 138 - -
Bma14g01608 280 MobiDBLite consensus disorder prediction 57 77 - -
Bma14g01608 280 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 279 IPR045224 GO:0003700
Bma14g01608 280 MobiDBLite consensus disorder prediction 173 196 - -
Bma14g01608 280 ProSiteProfiles 'Homeobox' domain profile. 72 132 IPR001356 GO:0003677
Bma14g01608 280 SMART HOX_1 75 136 IPR001356 GO:0003677
Bma14g01608 280 CDD homeodomain 77 133 IPR001356 GO:0003677
Bma14g01608 280 ProSitePatterns 'Homeobox' domain signature. 107 130 IPR017970 GO:0000981|GO:0006355
Bma14g01608 280 Pfam Homeobox associated leucine zipper 132 172 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00088 Bma-Chr1:994635 Bma14g01608 Bma-Chr14:33712885 6.74E-127 dispersed
Bma14g01608 Bma-Chr14:33712885 Bma06g00299 Bma-Chr6:4444601 1.15E-38 dispersed
Bma14g01608 Bma-Chr14:33712885 Bma14g01636 Bma-Chr14:34559003 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58401 PF00046 Homeodomain 9.30E-15 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01608 K09338 - rcu:8286990 389.423