Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01618 ATGGAAGGAAGTAAAAGTGAGGTGACAGTGTTTGGAACAAGGTATAGTGCTTACTGCAACAGAGTGTTGTTAGCCCTTAAACTCAAGGGCATACCTTATGAGTATGTAGAAGAAGATTTGAACTCTAAAAGTGAACTGCTTCTCCGTTACAACCCTGTCCACAAGAAGGTTCCTGTTCTTGTCCACAAAGGCAAGCCCCTGGCTGAATCTCTTACCATCCTTGAATACATCGACGAATGTTGGAATCAAGCTCCTAAATTACTCCCGGACGATCCTTATCAGAGATCCAAAGTCCGCTTTTGGGTGCAATTTTATGATCAGAAAATCAGGCCCGCGACACTCCCGATCATCAAATCAGAGGGGGAGGAGCGAGAGAAAGCAATAGAAGAATTCAACAAGTTGTTGAGTGTTTTCGAAGAAGGAACCGCGAAAGATTTTCCCGGAGAATTCGAGTTCTTCTGCAGTGATAACTTAGGACTTCTAGAGATTGTCGTGGGTGTAAATGCTTGTAACTATAAAGCATTTCATCAGGTCATTGGAGAAGTTATTGGACCAGAAAAGAATCGTGCATTTTTTTTGAAGGTAAAAGCTTTAAAGAAACACCCTCTGATGAAGGAGACGATTCCTCCTCACCAACAATTGGTGGCCAAGATGGCTGATAAGTACTTGAAAAAGCCATGA 681 42.44 MEGSKSEVTVFGTRYSAYCNRVLLALKLKGIPYEYVEEDLNSKSELLLRYNPVHKKVPVLVHKGKPLAESLTILEYIDECWNQAPKLLPDDPYQRSKVRFWVQFYDQKIRPATLPIIKSEGEEREKAIEEFNKLLSVFEEGTAKDFPGEFEFFCSDNLGLLEIVVGVNACNYKAFHQVIGEVIGPEKNRAFFLKVKALKKHPLMKETIPPHQQLVAKMADKYLKKP 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 33921496 33922449 + Bma012321.1 Bma14g01618 95599

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01618 226 CDD GST_N_Tau 8 81 - -
Bma14g01618 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 226 IPR010987 -
Bma14g01618 226 SFLD Main.3: Omega- and Tau-like 5 220 IPR045073 -
Bma14g01618 226 ProSiteProfiles Glutaredoxin domain profile. 1 95 - -
Bma14g01618 226 CDD GST_C_Tau 92 216 IPR045074 GO:0004364|GO:0006749
Bma14g01618 226 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Bma14g01618 226 SUPERFAMILY Thioredoxin-like 8 109 IPR036249 -
Bma14g01618 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 219 IPR045073 -
Bma14g01618 226 Gene3D Glutaredoxin 1 87 - -
Bma14g01618 226 SFLD Glutathione Transferase (cytosolic) 5 220 IPR040079 -
Bma14g01618 226 Gene3D - 88 225 - -
Bma14g01618 226 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 219 - -
Bma14g01618 226 SUPERFAMILY GST C-terminal domain-like 79 216 IPR036282 -
Bma14g01618 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01618 K00799 GST, gst; glutathione S-transferase [EC:2.5.1.18] - qsu:112031608 291.582
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00524 Bma-Chr9:41896855 Bma14g01618 Bma-Chr14:33921496 6.28E-51 transposed
Bma14g01618 Bma-Chr14:33921496 Bma14g01643 Bma-Chr14:34753479 1.61E-161 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g831 . . . . . . Bma14g01618 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012942 0 1 0 2 0 2 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 0 1 2 28
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g01618 Bma_Chr14 FPKM 3.217799 2.38663 0.0 0.544825 13.926429 10.908507 12.459856 0.0 0.0 0.0