Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01641 ATGGCAATCAAGTCAAACTTCATTGACGGAAGGACCAGGAGCTCTGTCCAAATTGTTGTGGTAGTTGGATTATGCTGCTTCTTCTACCTATTGGGTGCGTGGCAAAAAAGCAGTTTTGGCAAAGGAGATCGAATAGCGGTAGAGATAACAGAGAAAGGAGCCGGATGTGATCTACTTCCCAATCTGAGCTTCGAGACCCATCATGGCGGAGAAGCTGGAAATTACGAAGACAACTTGAAAACACTCAAACCGTGCGATGCTCGTTTCACCGATTACACGCCCTGCCAAGACCAAAGACGGGCCATGACCTTCCCTCGGGAAAGCATGATTTATCGAGAGAGGCACTGTCCGAGCGAGGAGGAGAAGCTCGAATGCCTTATTCCCGCACCCAATGGATATGTCACTCCCTTTTCTTGGCCGAAGAGTCGAGACTTTGTGCCCTTTGCGAATGCGCCTTATAAGAGTTTGACCGTGGAGAAGGCTATACAGAATTGGATTCAATATGAAGGCAATGTGTTTCGATTTCCCGGTGGGGGAACACAGTTTCCGCAAGGGGCTGATAAATACATTGACCAGCTAGCTTCGGTTATACCGATGCACAACGGGACGGTCCGAACTGCACTAGACACTGGATGTGGGGTTGCTAGCTGGGGAGCTTACCTTTTAGGTAGGAATGTTATCGCGATGTCATTTGCGCCGAGAGATTCGCATGAAGCACAAGTCCAATTTGCTTTGGAAAGAGGCGTGCCTGCCGTTATTGGTGTTTTAGGCACGATTAAGCTGCCTTATCCGGCTAGAGCTTTCGACATGGCTCACTGCTCTCGTTGTTTAATTCCTTGGGGCGCAAATGATGGAATGTACTTGAAGGAAGTCGATCGAGTTCTTAGACCAGGTGGGTATTGGGTTCTTTCCGGTCCGCCCATCAACTGGAAAAACTTGTACAAGTCTTGGCAGCGTCCCAAAGAGGAGCTCGAAGAGGAACAGAGAAAGATCGAAGAAATAGCTGAGCTACTCTGTTGGGAAAAGAAGTACGAGGGTGGCGAAACCGCCATTTGGCAGAAACGAGTTAGCACCGATTCGTGCTCTAGCAGAAATGAAATTTGCGAATCTACCGAAATAGACGAAGTTTGGTACAAGAAAATGGAGGGGTGCATAACTCCATACCCGGACCAGGACGAAGCATCCATAGGGGAACTAAAGGCCTTCCCAGAAAGGCTACATGCCGTCCCTCCTAGAATTTCCCGTGGATCTGTTCCTGAAGTCTCTGTTGGGACATATCAGGAGGATAACAATTTATGGAAAAAGCATGCGAAGGCTTATCGGAAAATCAATAAATTTATCAGTACGGGTCGATATCGCAATGTTATGGACATGAACGCCGGTTTGGGAGGTTTTGCTGCAGCAATACACTCGACAAAATTATGGGTTATGAACGTTGTTCCGACCATTGCTGAGAAAAATACATTAGGGGTCATATACGAGCGGGGATTGATCGGCATCTATCACGATTGGTGTGAAGCCTTCTCTACGTACCCTAGGACATACGACCTCATTCATGCTAATGGAGTTTTCAGTCTATACAAGGACAGGTGCAAAATGGAGGACATACTTCTGGAAATGGACAGGATACTGAGACCAGAAGGAGCCGTCATATTCCGAGACGAAGTAGATGTTCTAATCCAAGTAAGGAGGACAGTTGCAGGAATGAGGTGGGACACAAAAATGGTGGATCACGAGGATGGTCCTCTTGTCCCCGAGAAGATACTGGTCGCTGTGAAGCAATACTGGGTTGTTGGTCAAAACTCCACATCCACTCCATGA 1821 47.61 MAIKSNFIDGRTRSSVQIVVVVGLCCFFYLLGAWQKSSFGKGDRIAVEITEKGAGCDLLPNLSFETHHGGEAGNYEDNLKTLKPCDARFTDYTPCQDQRRAMTFPRESMIYRERHCPSEEEKLECLIPAPNGYVTPFSWPKSRDFVPFANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIPMHNGTVRTALDTGCGVASWGAYLLGRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPARAFDMAHCSRCLIPWGANDGMYLKEVDRVLRPGGYWVLSGPPINWKNLYKSWQRPKEELEEEQRKIEEIAELLCWEKKYEGGETAIWQKRVSTDSCSSRNEICESTEIDEVWYKKMEGCITPYPDQDEASIGELKAFPERLHAVPPRISRGSVPEVSVGTYQEDNNLWKKHAKAYRKINKFISTGRYRNVMDMNAGLGGFAAAIHSTKLWVMNVVPTIAEKNTLGVIYERGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKDRCKMEDILLEMDRILRPEGAVIFRDEVDVLIQVRRTVAGMRWDTKMVDHEDGPLVPEKILVAVKQYWVVGQNSTSTP 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 34709065 34711762 - Bma012356.1 Bma14g01641 95622

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01641 606 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 2 601 IPR004159 GO:0008168
Bma14g01641 606 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 91 593 IPR004159 GO:0008168
Bma14g01641 606 CDD AdoMet_MTases 206 304 - -
Bma14g01641 606 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 328 IPR029063 -
Bma14g01641 606 Gene3D Vaccinia Virus protein VP39 159 355 IPR029063 -
Bma14g01641 606 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 435 555 IPR029063 -
Bma14g01641 606 PANTHER METHYLTRANSFERASE PMT2-RELATED 2 601 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01641 - - - jre:108988781 1053.12
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma14g01641 Bma15g00160 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00177 Bma-Chr6:2230330 Bma14g01641 Bma-Chr14:34709065 1.50E-145 dispersed
Bma14g01616 Bma-Chr14:33910150 Bma14g01641 Bma-Chr14:34709065 0 wgd
Bma14g01641 Bma-Chr14:34709065 Bma15g00160 Bma-Chr15:1694621 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g66 . . Bda01g02130 . . . Bma14g01641 . . Cmo18g01134 . Cma18g01112 . Car18g01026 Sed06g1770 . . Bhi07g01503 Tan04g1016 Cmetu03g1484 . . . . . . . . . . . . . . . . Csa05g02505 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi1g905 . . . . . Bpe10g00868 Bma14g01641 Bma15g00160 . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0590 Cone9ag0593 . . . . Blo06g00905 Blo11g00770 . . Bpe11g01640 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004647 1 1 2 3 3 1 2 1 1 1 1 1 2 1 1 2 1 3 1 1 1 1 1 1 1 1 1 2 1 2 42