Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01646 ATGGCTTCCGACCCACAAGTTTCTGAAATTTCTGCTCTGTTCGAGAGGTTGATGAGTAACAGAGATCTTTCCATGTTCTTACCCTTTCTACTCGGATTCAATCAAGAAAACCCAGATCCAGAAAATGAAAACAGATCGAACCCTACAGATAGAATCATCATCATCAATCCTTCTACTCAAGGTTTGGTGGTAATTGAAGGTGCTTCTAGCTTCGAATCCCTGCTTCGAGAATTGCGTAGCAAAAACGGTCAACCTCCTGCGTCAAAAGCGTCCATCGAAGCGATGCCGACTGAAGAAATACGAGAAGAGTGCGAGTGTACGATTTGCTTAGATGAGTTTGAAATCGGTAGTCAGGCGAAAAAAATGCCGTGTAACCATAAATTTCATGGCGATTGTATAAAAAAGTGGCTAGAATTGCACGGGTCCTGCCCGATTTGTCGGTTTTTGTTGCCTGCTGATGAAGATGATGTTGGGAAGAAGAGTGATAGGGAGATTTGGGTCAGTTTTTCTTTCAATGGCGAAGGGAGAAATGGGGATTCGAACCACAGTTCTTCCAATGAGTTCGATCGTTCTTCCTCGACATCTGAAGAACTGGAAGGCTTCCATCAGAAATGGTGCTTCCACTTCTCTTCACTCCAATGGCATGATTTTTCAACCCATCCCATTCATTCTCAGCTCCATGAATGTCTAGTAATGAAAACTCAGCACTACTTTCTGCCGATTTTTGAGTATAGCCCTGTTGCTTCTCTTCTTCGATTCCAGAGATTTCCGATAATTCGAAAGAGCTTGCCATTGAAATTGGTCTCATTTGATTATTTTCGTCATTATTGA 831 42.48 MASDPQVSEISALFERLMSNRDLSMFLPFLLGFNQENPDPENENRSNPTDRIIIINPSTQGLVVIEGASSFESLLRELRSKNGQPPASKASIEAMPTEEIREECECTICLDEFEIGSQAKKMPCNHKFHGDCIKKWLELHGSCPICRFLLPADEDDVGKKSDREIWVSFSFNGEGRNGDSNHSSSNEFDRSSSTSEELEGFHQKWCFHFSSLQWHDFSTHPIHSQLHECLVMKTQHYFLPIFEYSPVASLLRFQRFPIIRKSLPLKLVSFDYFRHY 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 34823291 34969244 + Bma030732 Bma14g01646 95627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01646 276 SMART ring_2 106 146 IPR001841 -
Bma14g01646 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 152 IPR013083 -
Bma14g01646 276 SUPERFAMILY RING/U-box 95 153 - -
Bma14g01646 276 ProSiteProfiles Zinc finger RING-type profile. 106 147 IPR001841 -
Bma14g01646 276 PANTHER - 8 162 - -
Bma14g01646 276 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 8 162 - -
Bma14g01646 276 Pfam Ring finger domain 105 147 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01646 Bma-Chr14:34823291 Bma03g00286 Bma-Chr3:2126692 9.99E-26 dispersed
Bma14g01646 Bma-Chr14:34823291 Bma07g00317 Bma-Chr7:3806447 3.61E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01646 - - zju:107429014 243.047