Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01653 ATGGATCTCTTTGTGTTTTTGGTTGTGGGTTTTCTATCACTCATCTCCTCCGTCAAAGGGTACAGCGGAGCAGGGTGGAACAGTGGCCGTGCGACCTTTTATGGTGGTGGAGATGCTTCTGGTACAATGGGAGGGGCTTGTGGGTATGGAAACCTATACAGCCAAGGGTACGGGACGGACACTGCAGCGCTGAGCACGGCTCTGTTCAACGAAGGTCTGAGCTGCGGTTCGTGCTACGAGATCCGATGCGTAAACGCCGGGTCGTCGTGCCTGCCGGGATCGATAGTGGTCACGGCCACCAACTTCTGCCCACCGAACAGCCAGGGCGGATGGTGCGACCCTCCTCAGCCGCACTTCGATCTCTCCCAGCCTGTTTTCCAGCACATAGCTCAATACAGAGCTGGAGTTGTGCCTGTGGCCTATAGAAGGAAGAAGGGAGGAATAAGGTTCACAATCAATGGACATTCCTTCTTCAACCTAGTTCTGGTCACCAACGTAGGAGGCGCCGGCGACGTCCATGCAGTTTCCATCAAAGGCTCGAGAACCGGGTGGCAAACGATGTCTAGAAACTGGGGCCAGAACTGGCAGAGCAACTCCTACCTCAACGGCCAAAGCCTGTCCTTCAAGGTCACCACCAGCGACGGCCAAACCGTCATCTCAAACGACGTCGCTCCGGCTGGCTGGTCTTTCGGCCAGACGTTCAGTGGTGCGCAATTCTAG 720 55.97 MDLFVFLVVGFLSLISSVKGYSGAGWNSGRATFYGGGDASGTMGGACGYGNLYSQGYGTDTAALSTALFNEGLSCGSCYEIRCVNAGSSCLPGSIVVTATNFCPPNSQGGWCDPPQPHFDLSQPVFQHIAQYRAGVVPVAYRRKKGGIRFTINGHSFFNLVLVTNVGGAGDVHAVSIKGSRTGWQTMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTVISNDVAPAGWSFGQTFSGAQF 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35040012 35040936 - Bma012380.1 Bma14g01653 95634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01653 239 SMART dpbb_1 61 141 IPR007112 -
Bma14g01653 239 Gene3D - 146 239 IPR036749 -
Bma14g01653 239 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 143 IPR007112 -
Bma14g01653 239 PRINTS Expansin signature 193 214 IPR002963 GO:0009664
Bma14g01653 239 PRINTS Expansin signature 56 70 IPR002963 GO:0009664
Bma14g01653 239 PRINTS Expansin signature 158 179 IPR002963 GO:0009664
Bma14g01653 239 PRINTS Expansin signature 95 105 IPR002963 GO:0009664
Bma14g01653 239 PRINTS Expansin signature 222 238 IPR002963 GO:0009664
Bma14g01653 239 PRINTS Expansin signature 146 158 IPR002963 GO:0009664
Bma14g01653 239 PRINTS Expansin signature 83 94 IPR002963 GO:0009664
Bma14g01653 239 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Bma14g01653 239 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Bma14g01653 239 PRINTS Expansin/Lol pI family signature 184 198 IPR007118 GO:0005576
Bma14g01653 239 PRINTS Expansin/Lol pI family signature 222 236 IPR007118 GO:0005576
Bma14g01653 239 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Bma14g01653 239 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Bma14g01653 239 Pfam Expansin C-terminal domain 148 225 IPR007117 -
Bma14g01653 239 PANTHER EXPANSIN-A15 6 239 IPR002963 GO:0009664
Bma14g01653 239 Gene3D - 14 145 IPR036908 -
Bma14g01653 239 PANTHER EXPANSIN 6 239 - -
Bma14g01653 239 SUPERFAMILY PHL pollen allergen 144 235 IPR036749 -
Bma14g01653 239 Pfam Lytic transglycolase 61 141 IPR009009 -
Bma14g01653 239 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 157 236 IPR007117 -
Bma14g01653 239 SUPERFAMILY Barwin-like endoglucanases 25 165 IPR036908 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00699 Bma14g01653 CCT
Bma06g00699 Bma14g01653 ECH
Bma14g01653 Bma15g00149 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g01139 Bma-Chr13:44599622 Bma14g01653 Bma-Chr14:35040012 1.31E-13 dispersed
Bma14g01653 Bma-Chr14:35040012 Bma03g00200 Bma-Chr3:1535352 5.51E-122 dispersed
Bma14g01653 Bma-Chr14:35040012 Bma15g00149 Bma-Chr15:1543263 5.90E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01653 - - qsu:112006857 409.838